RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 EXOSC9Q06265 439 aaKnown RBP7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 FKBP8Q14318 412 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 USPL1Q5W0Q7 1092 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 MSL1Q68DK7 614 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 DZIP3Q86Y13 1208 aaKnown RBP7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 NLGN1Q8N2Q7 840 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 CDCA7LQ96GN5 454 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 DBF4Q9UBU7 674 aaPredicted RBP7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 LAMB2P55268 1798 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 C10orf71Q711Q0 1435 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 MAP3K15Q6ZN16 1313 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 GOLGB1Q14789 3259 aaKnown RBP7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 VAMP4O75379 141 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 COL11A2P13942 1736 aaPredicted RBP7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 MYL6BP14649 208 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 DDR1Q08345 913 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 CCDC30Q5VVM6 783 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 TTLL7Q6ZT98 887 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 NECTIN2Q92692 538 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 CHMP4AQ9BY43 222 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 TBC1D2BQ9UPU7 963 aa7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 ZNF330Q9Y3S2 320 aaPredicted RBP7.31□□□□□ -1.24
RPUSD4-204ENST00000530036 ERVV-1B6SEH8 477 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 POLRMTO00411 1230 aaKnown RBP7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 MMP10P09238 476 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 POLD1P28340 1107 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 TM4SF1P30408 202 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 CLEC4GQ6UXB4 293 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 ARXQ96QS3 562 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 TNRC6CQ9HCJ0 1690 aaKnown RBP7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 CARMIL3Q8ND23 1372 aa7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 IBTKQ9P2D0 1353 aaPredicted RBP7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 DDX60Q8IY21 1712 aaKnown RBP7.3□□□□□ -1.24
RPUSD4-204ENST00000530036 CT47B1P0C2W7 299 aaPredicted RBP7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 NFIXQ14938 502 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 TBC1D9BQ66K14 1250 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 GIGYF2Q6Y7W6 1299 aaKnown RBP7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 KIF6Q6ZMV9 814 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 COPS6Q7L5N1 327 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 XAGE3Q8WTP9 111 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 STK31Q9BXU1 1019 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 ZNF652Q9Y2D9 606 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 ARFGEF1Q9Y6D6 1849 aa7.29□□□□□ -1.24
RPUSD4-204ENST00000530036 RIC1Q4ADV7 1423 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 CACNA1SQ13698 1873 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 HLFQ16534 295 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 PLBD2Q8NHP8 589 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 ZNF428Q96B54 188 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 ZBTB3Q9H5J0 574 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 PHAXQ9H814 394 aaKnown RBP7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 PARP3Q9Y6F1 533 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 ADCY9O60503 1353 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 MYH3P11055 1940 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 PXDNLA1KZ92 1463 aa7.28□□□□□ -1.24
RPUSD4-204ENST00000530036 UBN2Q6ZU65 1347 aa7.27□□□□□ -1.24
RPUSD4-204ENST00000530036 TCERG1O14776 1098 aaKnown RBP7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 SLC4A2P04920 1241 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 AIMP1Q12904 312 aaKnown RBP7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 FLIIQ13045 1269 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 ALDH1L2Q3SY69 923 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 ANKRD13DQ6ZTN6 518 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 G2E3Q7L622 706 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 ZNF34Q8IZ26 560 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 FHDC1Q9C0D6 1143 aaPredicted RBP7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 CD2APQ9Y5K6 639 aa7.27□□□□□ -1.25
RPUSD4-204ENST00000530036 SLC34A2O95436 690 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 SERPINB2P05120 415 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 HSP90AB3PQ58FF7 597 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 PRR5LQ6MZQ0 368 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 BICDL1Q6ZP65 573 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 SSH1Q8WYL5 1049 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 SYT17Q9BSW7 474 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 ISCA1Q9BUE6 129 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 NIP7Q9Y221 180 aaKnown RBP eCLIP7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 UTRNP46939 3433 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 RNF123Q5XPI4 1314 aa7.26□□□□□ -1.25
RPUSD4-204ENST00000530036 ABCC12Q96J65 1359 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 NTSR2O95665 410 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 DDX58O95786 925 aaKnown RBP7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 TRIM28Q13263 835 aaKnown RBP7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 KSR2Q6VAB6 950 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 MRPL50Q8N5N7 158 aaKnown RBP7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 CNBD1Q8NA66 436 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 NLGN2Q8NFZ4 835 aa7.25□□□□□ -1.25
RPUSD4-204ENST00000530036 PI4KAP2A4QPH2 592 aa7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 GPTP24298 496 aa7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 RARSP54136 660 aaKnown RBP7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 FKBP5Q13451 457 aaPredicted RBP7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 RIC3Q7Z5B4 369 aa7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 NBPF5PQ86XG9 351 aaPredicted RBP7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 PI4KAP1Q8N8J0 262 aa7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 METTL22Q9BUU2 404 aaPredicted RBP7.24□□□□□ -1.25
RPUSD4-204ENST00000530036 NYXQ9GZU5 481 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms