RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
PUF60-213ENST00000528999 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
PUF60-213ENST00000528999 SGSM2O43147 1006 aa13□□□□□ -0.33
PUF60-213ENST00000528999 IFIT2P09913 472 aaKnown RBP13□□□□□ -0.33
PUF60-213ENST00000528999 HSPA4P34932 840 aa13□□□□□ -0.33
PUF60-213ENST00000528999 CUL4AQ13619 759 aa13□□□□□ -0.33
PUF60-213ENST00000528999 COPS6Q7L5N1 327 aa13□□□□□ -0.33
PUF60-213ENST00000528999 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
PUF60-213ENST00000528999 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
PUF60-213ENST00000528999 EVI5LQ96CN4 794 aa13□□□□□ -0.33
PUF60-213ENST00000528999 CYP2E1P05181 493 aaPredicted RBP12.99□□□□□ -0.33
PUF60-213ENST00000528999 IGKV5-2P06315 115 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 KIAA1211Q6ZU35 1233 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 XAGE3Q8WTP9 111 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 COPRSQ9NQ92 184 aa12.99□□□□□ -0.33
PUF60-213ENST00000528999 PARP4Q9UKK3 1724 aaKnown RBP12.99□□□□□ -0.33
PUF60-213ENST00000528999 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 NEK4P51957 841 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
PUF60-213ENST00000528999 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
PUF60-213ENST00000528999 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
PUF60-213ENST00000528999 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 IL2RBP14784 551 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 AIMP1Q12904 312 aaKnown RBP12.97□□□□□ -0.33
PUF60-213ENST00000528999 RABL6Q3YEC7 729 aaPredicted RBP12.97□□□□□ -0.33
PUF60-213ENST00000528999 KCNB2Q92953 911 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
PUF60-213ENST00000528999 RAD50Q92878 1312 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 HSPA2P54652 639 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 MYD88Q99836 296 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
PUF60-213ENST00000528999 TM6SF1Q9BZW5 370 aa12.96□□□□□ -0.33
PUF60-213ENST00000528999 BICC1Q9H694 974 aaKnown RBP12.96□□□□□ -0.33
PUF60-213ENST00000528999 SASH1O94885 1247 aa12.95□□□□□ -0.34
PUF60-213ENST00000528999 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
PUF60-213ENST00000528999 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
PUF60-213ENST00000528999 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
PUF60-213ENST00000528999 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
PUF60-213ENST00000528999 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
PUF60-213ENST00000528999 DIAPH3Q9NSV4 1193 aa12.95□□□□□ -0.34
PUF60-213ENST00000528999 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
PUF60-213ENST00000528999 H7C1W4 665 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 MYL6BP14649 208 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 MRE11P49959 708 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 AACSQ86V21 672 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
PUF60-213ENST00000528999 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
PUF60-213ENST00000528999 SSFA2P28290 1259 aa12.93□□□□□ -0.34
PUF60-213ENST00000528999 EVA1CP58658 441 aa12.93□□□□□ -0.34
PUF60-213ENST00000528999 KLHL40Q2TBA0 621 aa12.93□□□□□ -0.34
PUF60-213ENST00000528999 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
PUF60-213ENST00000528999 RFX7Q2KHR2 1363 aa12.93□□□□□ -0.34
PUF60-213ENST00000528999 ATP5JP18859 108 aa12.92□□□□□ -0.34
PUF60-213ENST00000528999 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
PUF60-213ENST00000528999 CASP7P55210 303 aa12.92□□□□□ -0.34
PUF60-213ENST00000528999 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
PUF60-213ENST00000528999 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
PUF60-213ENST00000528999 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
PUF60-213ENST00000528999 ZSCAN31Q96LW9 406 aaPredicted RBP12.92□□□□□ -0.34
PUF60-213ENST00000528999 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
PUF60-213ENST00000528999 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
PUF60-213ENST00000528999 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
PUF60-213ENST00000528999 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 PALD1Q9ULE6 856 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
PUF60-213ENST00000528999 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 C5P01031 1676 aa12.91□□□□□ -0.34
PUF60-213ENST00000528999 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
PUF60-213ENST00000528999 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
PUF60-213ENST00000528999 A0A087WZG4 1122 aa12.9□□□□□ -0.34
PUF60-213ENST00000528999 BRD1O95696 1058 aa12.9□□□□□ -0.34
PUF60-213ENST00000528999 PTPN12Q05209 780 aaKnown RBP12.9□□□□□ -0.34
PUF60-213ENST00000528999 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
PUF60-213ENST00000528999 CWC25Q9NXE8 425 aaPredicted RBP12.9□□□□□ -0.34
PUF60-213ENST00000528999 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
PUF60-213ENST00000528999 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
PUF60-213ENST00000528999 PSMA5P28066 241 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
PUF60-213ENST00000528999 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms