RNA–Protein interactions for RNA: ENST00000528847.1

RPS3-211, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-211ENST00000528847 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
RPS3-211ENST00000528847 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
RPS3-211ENST00000528847 C7orf43Q8WVR3 580 aa13.8□□□□□ -0.2
RPS3-211ENST00000528847 CNKSR1Q969H4 720 aa13.8□□□□□ -0.2
RPS3-211ENST00000528847 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
RPS3-211ENST00000528847 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
RPS3-211ENST00000528847 RASSF10A6NK89 507 aa13.79□□□□□ -0.2
RPS3-211ENST00000528847 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
RPS3-211ENST00000528847 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
RPS3-211ENST00000528847 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
RPS3-211ENST00000528847 ZNF541Q9H0D2 1346 aa13.79□□□□□ -0.2
RPS3-211ENST00000528847 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
RPS3-211ENST00000528847 A1BGP04217 495 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
RPS3-211ENST00000528847 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
RPS3-211ENST00000528847 WDR33Q9C0J8 1336 aaKnown RBP13.78□□□□□ -0.2
RPS3-211ENST00000528847 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
RPS3-211ENST00000528847 EPHX2P34913 555 aa13.77□□□□□ -0.21
RPS3-211ENST00000528847 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
RPS3-211ENST00000528847 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
RPS3-211ENST00000528847 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
RPS3-211ENST00000528847 NPHP1O15259 732 aa13.76□□□□□ -0.21
RPS3-211ENST00000528847 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
RPS3-211ENST00000528847 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
RPS3-211ENST00000528847 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
RPS3-211ENST00000528847 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
RPS3-211ENST00000528847 RGS19P49795 217 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 ST5P78524 1137 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 MAP2K1Q02750 393 aaPredicted RBP13.75□□□□□ -0.21
RPS3-211ENST00000528847 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPS3-211ENST00000528847 MLLT1Q03111 559 aaPredicted RBP13.75□□□□□ -0.21
RPS3-211ENST00000528847 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
RPS3-211ENST00000528847 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
RPS3-211ENST00000528847 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
RPS3-211ENST00000528847 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
RPS3-211ENST00000528847 FZD9O00144 591 aa13.73□□□□□ -0.21
RPS3-211ENST00000528847 KCNQ3O43525 872 aa13.73□□□□□ -0.21
RPS3-211ENST00000528847 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
RPS3-211ENST00000528847 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
RPS3-211ENST00000528847 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.215e-35■□□□□ 8.5
RPS3-211ENST00000528847 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
RPS3-211ENST00000528847 CASP8AP2Q9UKL3 1982 aa13.72□□□□□ -0.21
RPS3-211ENST00000528847 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
RPS3-211ENST00000528847 NPR1P16066 1061 aa13.72□□□□□ -0.21
RPS3-211ENST00000528847 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
RPS3-211ENST00000528847 SYNE4Q8N205 404 aa13.72□□□□□ -0.21
RPS3-211ENST00000528847 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
RPS3-211ENST00000528847 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
RPS3-211ENST00000528847 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
RPS3-211ENST00000528847 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
RPS3-211ENST00000528847 GRM1Q13255 1194 aa13.71□□□□□ -0.21
RPS3-211ENST00000528847 CYP4F22Q6NT55 531 aa13.71□□□□□ -0.21
RPS3-211ENST00000528847 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
RPS3-211ENST00000528847 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
RPS3-211ENST00000528847 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
RPS3-211ENST00000528847 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
RPS3-211ENST00000528847 THSD7BQ9C0I4 1608 aa13.71□□□□□ -0.22
RPS3-211ENST00000528847 COL4A5P29400 1685 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 TEFQ10587 303 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 CST9Q5W186 159 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 GPC2Q8N158 579 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
RPS3-211ENST00000528847 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
RPS3-211ENST00000528847 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
RPS3-211ENST00000528847 AOC2O75106 756 aa13.69□□□□□ -0.22
RPS3-211ENST00000528847 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
RPS3-211ENST00000528847 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
RPS3-211ENST00000528847 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
RPS3-211ENST00000528847 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
RPS3-211ENST00000528847 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
RPS3-211ENST00000528847 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
RPS3-211ENST00000528847 TRAF5O00463 557 aa13.68□□□□□ -0.22
RPS3-211ENST00000528847 DIAPH1O60610 1272 aaKnown RBP13.68□□□□□ -0.22
RPS3-211ENST00000528847 EPS15P42566 896 aa13.68□□□□□ -0.22
RPS3-211ENST00000528847 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
RPS3-211ENST00000528847 SNED1Q8TER0 1413 aa13.67□□□□□ -0.22
RPS3-211ENST00000528847 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPS3-211ENST00000528847 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
RPS3-211ENST00000528847 SLC51AQ86UW1 340 aa13.67□□□□□ -0.22
RPS3-211ENST00000528847 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
RPS3-211ENST00000528847 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
RPS3-211ENST00000528847 SCNN1DP51172 638 aa13.66□□□□□ -0.22
RPS3-211ENST00000528847 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
RPS3-211ENST00000528847 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
RPS3-211ENST00000528847 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.221e-39■■■■■ 33
RPS3-211ENST00000528847 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 ECE1P42892 770 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 HLFQ16534 295 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 973.4 ms