RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RAD50Q92878 1312 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 MCM2P49736 904 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 ANAPC15P60006 121 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 FAM173BQ6P4H8 233 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 ZNF830Q96NB3 372 aaPredicted RBP8.99□□□□□ -0.97
C11orf54-207ENST00000528288 BICC1Q9H694 974 aaKnown RBP8.99□□□□□ -0.97
C11orf54-207ENST00000528288 PXDNQ92626 1479 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 GIGYF1O75420 1035 aaPredicted RBP8.99□□□□□ -0.97
C11orf54-207ENST00000528288 AKAP4Q5JQC9 854 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 ARID3AQ99856 593 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
C11orf54-207ENST00000528288 SYT1P21579 422 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 FERMT3Q86UX7 667 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 DBF4Q9UBU7 674 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 R3HCC1Q9Y3T6 440 aaKnown RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 VPS37CA5D8V6 355 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 EAF2Q96CJ1 260 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 RBM10P98175 930 aaKnown RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 NLRP2Q9NX02 1062 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 SMC3Q9UQE7 1217 aa8.98□□□□□ -0.97
C11orf54-207ENST00000528288 RPAP1Q9BWH6 1393 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-207ENST00000528288 RGPD2P0DJD1 1756 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 ARHGAP23Q9P227 1491 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 PTMAP06454 111 aaKnown RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 STK3Q13188 491 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 TCHHQ07283 1943 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 PPFIA3O75145 1194 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 GLRX3O76003 335 aaKnown RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 SASH1O94885 1247 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 NMIQ13287 307 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 KSR2Q6VAB6 950 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 INTS4Q96HW7 963 aaKnown RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 TTC14Q96N46 770 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 TSPY26PQ9H489 355 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 ECHDC1Q9NTX5 307 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 PDRG1Q9NUG6 133 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 GJB2P29033 226 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 EPHA10Q5JZY3 1008 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
C11orf54-207ENST00000528288 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
C11orf54-207ENST00000528288 STX6O43752 255 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 SLIT1O75093 1534 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 ATP5J2-PTCD1G3V325 749 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 PTCD1O75127 700 aaKnown RBP8.96□□□□□ -0.97
C11orf54-207ENST00000528288 MBD3O95983 291 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 G3BP1Q13283 466 aaKnown RBP eCLIP8.96□□□□□ -0.97
C11orf54-207ENST00000528288 CHRNA2Q15822 529 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.97
C11orf54-207ENST00000528288 MYD88Q99836 296 aa8.96□□□□□ -0.97
C11orf54-207ENST00000528288 A0A0D9SFI3 127 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 GRM8O00222 908 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 ZSCAN22P10073 491 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-207ENST00000528288 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
C11orf54-207ENST00000528288 SLFNL1Q499Z3 407 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 HYPKQ9NX55 129 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 USP25Q9UHP3 1055 aa8.96□□□□□ -0.98
C11orf54-207ENST00000528288 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.98
C11orf54-207ENST00000528288 FOSBP53539 338 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 ME3Q16798 604 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 XAGE3Q8WTP9 111 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
C11orf54-207ENST00000528288 IGKV5-2P06315 115 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 COPS6Q7L5N1 327 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 KCNH5Q8NCM2 988 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 FSD1Q9BTV5 496 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 BABAM1Q9NWV8 329 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 AOX1Q06278 1338 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 LRRC37A3O60309 1634 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 ANKARQ7Z5J8 1434 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 HSP90AB4PQ58FF6 505 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 CCDC129Q6ZRS4 1044 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 KRT28Q7Z3Y7 464 aa8.95□□□□□ -0.98
C11orf54-207ENST00000528288 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
C11orf54-207ENST00000528288 LTN1O94822 1766 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 HSP90AA2PQ14568 343 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-207ENST00000528288 PDLIM2Q96JY6 352 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 TPCN1Q9ULQ1 816 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 USP16Q9Y5T5 823 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 F13A1P00488 732 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 PDIA6Q15084 440 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 CAMK4Q16566 473 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 CREB3L3Q68CJ9 461 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 SEC62Q99442 399 aaKnown RBP8.94□□□□□ -0.98
C11orf54-207ENST00000528288 DNAJC2Q99543 621 aaKnown RBP8.94□□□□□ -0.98
C11orf54-207ENST00000528288 LRRC2Q9BYS8 371 aa8.94□□□□□ -0.98
C11orf54-207ENST00000528288 ZNF496Q96IT1 587 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-207ENST00000528288 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms