RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
CHD7-207ENST00000527921 CNBD1Q8NA66 436 aa16.04■□□□□ 0.16
CHD7-207ENST00000527921 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.168e-8■■□□□ 12.3
CHD7-207ENST00000527921 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
CHD7-207ENST00000527921 DICER1Q9UPY3 1922 aaKnown RBP16.04■□□□□ 0.16
CHD7-207ENST00000527921 KDM3BQ7LBC6 1761 aa16.03■□□□□ 0.16
CHD7-207ENST00000527921 POTECB2RU33 542 aa16.03■□□□□ 0.16
CHD7-207ENST00000527921 C21orf2O43822 256 aa16.03■□□□□ 0.16
CHD7-207ENST00000527921 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
CHD7-207ENST00000527921 LTBP3Q9NS15 1303 aa16.02■□□□□ 0.16
CHD7-207ENST00000527921 RGL2O15211 777 aa16.02■□□□□ 0.16
CHD7-207ENST00000527921 HTRA3P83110 453 aa16.02■□□□□ 0.16
CHD7-207ENST00000527921 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
CHD7-207ENST00000527921 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
CHD7-207ENST00000527921 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
CHD7-207ENST00000527921 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
CHD7-207ENST00000527921 C7orf43Q8WVR3 580 aa16.01■□□□□ 0.15
CHD7-207ENST00000527921 MIS18AQ9NYP9 233 aa16.01■□□□□ 0.15
CHD7-207ENST00000527921 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
CHD7-207ENST00000527921 ST5P78524 1137 aa16■□□□□ 0.15
CHD7-207ENST00000527921 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
CHD7-207ENST00000527921 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
CHD7-207ENST00000527921 CNKSR1Q969H4 720 aa16■□□□□ 0.15
CHD7-207ENST00000527921 MASTLQ96GX5 879 aa16■□□□□ 0.15
CHD7-207ENST00000527921 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
CHD7-207ENST00000527921 VEGFAP15692 232 aaPredicted RBP15.99■□□□□ 0.15
CHD7-207ENST00000527921 HLFQ16534 295 aa15.99■□□□□ 0.15
CHD7-207ENST00000527921 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
CHD7-207ENST00000527921 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
CHD7-207ENST00000527921 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
CHD7-207ENST00000527921 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
CHD7-207ENST00000527921 ERFEQ4G0M1 354 aa15.97■□□□□ 0.15
CHD7-207ENST00000527921 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
CHD7-207ENST00000527921 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
CHD7-207ENST00000527921 THUMPD2Q9BTF0 503 aaKnown RBP15.97■□□□□ 0.15
CHD7-207ENST00000527921 TAOK3Q9H2K8 898 aa15.97■□□□□ 0.15
CHD7-207ENST00000527921 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHD7-207ENST00000527921 NFE2L2Q16236 605 aa15.96■□□□□ 0.15
CHD7-207ENST00000527921 NPHP1O15259 732 aa15.95■□□□□ 0.14
CHD7-207ENST00000527921 NPR1P16066 1061 aa15.95■□□□□ 0.14
CHD7-207ENST00000527921 TPTE2Q6XPS3 522 aa15.95■□□□□ 0.14
CHD7-207ENST00000527921 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
CHD7-207ENST00000527921 NUP98P52948 1817 aa15.95■□□□□ 0.14
CHD7-207ENST00000527921 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
CHD7-207ENST00000527921 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
CHD7-207ENST00000527921 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
CHD7-207ENST00000527921 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
CHD7-207ENST00000527921 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
CHD7-207ENST00000527921 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
CHD7-207ENST00000527921 DDNO94850 711 aaPredicted RBP15.92■□□□□ 0.14
CHD7-207ENST00000527921 CRY2Q49AN0 593 aa15.92■□□□□ 0.14
CHD7-207ENST00000527921 TTLL7Q6ZT98 887 aa15.92■□□□□ 0.14
CHD7-207ENST00000527921 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
CHD7-207ENST00000527921 MAP3K15Q6ZN16 1313 aa15.92■□□□□ 0.14
CHD7-207ENST00000527921 FAM177BA6PVY3 158 aa15.91■□□□□ 0.14
CHD7-207ENST00000527921 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHD7-207ENST00000527921 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
CHD7-207ENST00000527921 UBN2Q6ZU65 1347 aa15.91■□□□□ 0.14
CHD7-207ENST00000527921 NEFMP07197 916 aa15.9■□□□□ 0.14
CHD7-207ENST00000527921 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
CHD7-207ENST00000527921 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
CHD7-207ENST00000527921 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
CHD7-207ENST00000527921 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
CHD7-207ENST00000527921 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
CHD7-207ENST00000527921 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
CHD7-207ENST00000527921 IBTKQ9P2D0 1353 aaPredicted RBP15.89■□□□□ 0.13
CHD7-207ENST00000527921 PDIA6Q15084 440 aa15.89■□□□□ 0.13
CHD7-207ENST00000527921 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
CHD7-207ENST00000527921 ZNF34Q8IZ26 560 aa15.89■□□□□ 0.13
CHD7-207ENST00000527921 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
CHD7-207ENST00000527921 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
CHD7-207ENST00000527921 MYL6BP14649 208 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 SUSD4Q5VX71 490 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 SCN4AP35499 1836 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 ERBB4Q15303 1308 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 ZNF541Q9H0D2 1346 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
CHD7-207ENST00000527921 COL4A5P29400 1685 aa15.87■□□□□ 0.13
CHD7-207ENST00000527921 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
CHD7-207ENST00000527921 RALBP1Q15311 655 aa15.87■□□□□ 0.13
CHD7-207ENST00000527921 CHADLQ6NUI6 762 aa15.87■□□□□ 0.13
CHD7-207ENST00000527921 ZBTB3Q9H5J0 574 aa15.87■□□□□ 0.13
CHD7-207ENST00000527921 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 NTSR2O95665 410 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 RIPK4P57078 832 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
CHD7-207ENST00000527921 KIF6Q6ZMV9 814 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 SLC51AQ86UW1 340 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 BABAM1Q9NWV8 329 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
CHD7-207ENST00000527921 FZD9O00144 591 aa15.85■□□□□ 0.13
CHD7-207ENST00000527921 GPTP24298 496 aa15.85■□□□□ 0.13
CHD7-207ENST00000527921 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
CHD7-207ENST00000527921 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
CHD7-207ENST00000527921 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
CHD7-207ENST00000527921 C3orf67Q6ZVT6 689 aa15.85■□□□□ 0.13
CHD7-207ENST00000527921 SYNE4Q8N205 404 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms