RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 M0R2N6 131 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 ATP9BO43861 1147 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 HIRAP54198 1017 aaPredicted RBP6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 CLDN10P78369 228 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 C1orf53Q5VUE5 145 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 CCDC102BQ68D86 513 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 LRRC69Q6ZNQ3 347 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 LARGE2Q8N3Y3 721 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 UCN2Q96RP3 112 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 MDFIQ99750 246 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 ZNF232Q9UNY5 417 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 KIAA1024Q9UPX6 916 aa6.61□□□□□ -1.35
LINCR-0001-203ENST00000524047 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 PALM3A6NDB9 673 aaPredicted RBP6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 ELOA3DA6NLF2 546 aaPredicted RBP6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 K7ELQ4 463 aaPredicted RBP6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 PSMA6P60900 246 aaKnown RBP6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 ELOA3BQ3SY89 546 aa6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 SYT9Q86SS6 491 aa6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 ELOA3Q8NG57 546 aa6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 NEUROD4Q9HD90 331 aa6.6□□□□□ -1.35
LINCR-0001-203ENST00000524047 SIN3BO75182 1162 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 CD163Q86VB7 1156 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 SIX5Q8N196 739 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 FNBP4Q8N3X1 1017 aaPredicted RBP6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 OGFOD1Q8N543 542 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 RHPN1Q8TCX5 695 aa6.59□□□□□ -1.35
LINCR-0001-203ENST00000524047 A6NJR5 290 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 ALAS2P22557 587 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 GLMNQ92990 594 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 TRIM11Q96F44 468 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 TSPAN10Q9H1Z9 355 aaPredicted RBP6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 ANKIB1Q9P2G1 1089 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 MKRN1Q9UHC7 482 aaKnown RBP6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 CHMP3Q9Y3E7 222 aa6.58□□□□□ -1.36
LINCR-0001-203ENST00000524047 DKK1O94907 266 aa6.57□□□□□ -1.36
LINCR-0001-203ENST00000524047 KCNQ4P56696 695 aa6.57□□□□□ -1.36
LINCR-0001-203ENST00000524047 SFSWAPQ12872 951 aaKnown RBP6.57□□□□□ -1.36
LINCR-0001-203ENST00000524047 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
LINCR-0001-203ENST00000524047 PLVAPQ9BX97 442 aa6.57□□□□□ -1.36
LINCR-0001-203ENST00000524047 FURINP09958 794 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 SPATA31C1P0DKV0 1188 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 CHRNA4P43681 627 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 STAG2Q8N3U4 1231 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 SLC30A3Q99726 388 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 PHACTR1Q9C0D0 580 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
LINCR-0001-203ENST00000524047 SPEM2Q0P670 501 aa6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 NEUROD1Q13562 356 aa6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 TSEN2Q8NCE0 465 aaKnown RBP6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 GAS2L2Q8NHY3 880 aa6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 BRD7Q9NPI1 651 aa6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 HCN4Q9Y3Q4 1203 aa6.55□□□□□ -1.36
LINCR-0001-203ENST00000524047 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 C21orf2O43822 256 aa6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 ZNF594Q96JF6 807 aaPredicted RBP6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 HSH2DQ96JZ2 352 aa6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 SUSD3Q96L08 255 aa6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 CEP63Q96MT8 703 aa6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
LINCR-0001-203ENST00000524047 SFI1A8K8P3 1242 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 PPP1R12BO60237 982 aaPredicted RBP6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 TYRO3Q06418 890 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 COL9A3Q14050 684 aaPredicted RBP6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 ALDH16A1Q8IZ83 802 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 ZNF280CQ8ND82 737 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 ZNF777Q9ULD5 760 aaPredicted RBP6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 KCNH4Q9UQ05 1017 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 STARD13Q9Y3M8 1113 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 ATAD2Q6PL18 1390 aa6.53□□□□□ -1.36
LINCR-0001-203ENST00000524047 M0R082 166 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 RASA1P20936 1047 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 SEC13P55735 322 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 HIF1AQ16665 826 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 XP32Q5T750 250 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 ZNF417Q8TAU3 575 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 ZNF587Q96SQ5 575 aaPredicted RBP6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 MAFBQ9Y5Q3 323 aaPredicted RBP6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 GTF3C3Q9Y5Q9 886 aa6.52□□□□□ -1.37
LINCR-0001-203ENST00000524047 ADH7P40394 386 aa6.51□□□□□ -1.37
LINCR-0001-203ENST00000524047 GATA4P43694 442 aa6.51□□□□□ -1.37
LINCR-0001-203ENST00000524047 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
LINCR-0001-203ENST00000524047 EFCC1Q9HA90 598 aa6.51□□□□□ -1.37
LINCR-0001-203ENST00000524047 ALBP02768 609 aa6.5□□□□□ -1.37
LINCR-0001-203ENST00000524047 C20orf204Q6ZNR8 217 aa6.5□□□□□ -1.37
LINCR-0001-203ENST00000524047 BTLAQ7Z6A9 289 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms