RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
NSMCE2-211ENST00000523549 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
NSMCE2-211ENST00000523549 ELOA3Q8NG57 546 aa8.9□□□□□ -0.98
NSMCE2-211ENST00000523549 TBCELQ5QJ74 424 aa8.89□□□□□ -0.99
NSMCE2-211ENST00000523549 SYT9Q86SS6 491 aa8.89□□□□□ -0.99
NSMCE2-211ENST00000523549 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
NSMCE2-211ENST00000523549 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
NSMCE2-211ENST00000523549 SERTM1A2A2V5 107 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 POM121CA8CG34 1229 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 ADARB2-AS1A8MUL3 147 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 SIN3BO75182 1162 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 SFSWAPQ12872 951 aaKnown RBP8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
NSMCE2-211ENST00000523549 CLDN10P78369 228 aa8.87□□□□□ -0.99
NSMCE2-211ENST00000523549 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
NSMCE2-211ENST00000523549 UCN2Q96RP3 112 aa8.87□□□□□ -0.99
NSMCE2-211ENST00000523549 SLC30A3Q99726 388 aa8.87□□□□□ -0.99
NSMCE2-211ENST00000523549 DKK1O94907 266 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 ITGB7P26010 798 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 TNFRSF25Q93038 417 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
NSMCE2-211ENST00000523549 M0R2N6 131 aa8.85□□□□□ -0.99
NSMCE2-211ENST00000523549 SPATA31C1P0DKV0 1188 aa8.85□□□□□ -0.99
NSMCE2-211ENST00000523549 ALAS2P22557 587 aa8.85□□□□□ -0.99
NSMCE2-211ENST00000523549 TSPAN10Q9H1Z9 355 aaPredicted RBP8.85□□□□□ -0.99
NSMCE2-211ENST00000523549 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 RAD21O60216 631 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 PRKCSHP14314 528 aaPredicted RBP8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 KCNQ4P56696 695 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 PSMA6P60900 246 aaKnown RBP8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 NEUROD4Q9HD90 331 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 PRDM6Q9NQX0 595 aa8.84□□□□□ -0.99
NSMCE2-211ENST00000523549 ATP9BO43861 1147 aa8.83□□□□□ -1
NSMCE2-211ENST00000523549 HCN4Q9Y3Q4 1203 aa8.83□□□□□ -1
NSMCE2-211ENST00000523549 FLIIQ13045 1269 aa8.82□□□□□ -1
NSMCE2-211ENST00000523549 DOC2BQ14184 412 aa8.82□□□□□ -1
NSMCE2-211ENST00000523549 Q8N3U1 123 aa8.82□□□□□ -1
NSMCE2-211ENST00000523549 OGFOD1Q8N543 542 aa8.82□□□□□ -1
NSMCE2-211ENST00000523549 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
NSMCE2-211ENST00000523549 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
NSMCE2-211ENST00000523549 C21orf2O43822 256 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 GATA4P43694 442 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 SPEM2Q0P670 501 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 SIX5Q8N196 739 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 MICALL1Q8N3F8 863 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 PHACTR1Q9C0D0 580 aa8.81□□□□□ -1
NSMCE2-211ENST00000523549 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
NSMCE2-211ENST00000523549 M0R082 166 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 C20orf204Q6ZNR8 217 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 ZNF280CQ8ND82 737 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 ZNF417Q8TAU3 575 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 ZNF587Q96SQ5 575 aaPredicted RBP8.8□□□□□ -1
NSMCE2-211ENST00000523549 BRD7Q9NPI1 651 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 ANKIB1Q9P2G1 1089 aa8.8□□□□□ -1
NSMCE2-211ENST00000523549 SPDYE3A6NKU9 549 aa8.79□□□□□ -1
NSMCE2-211ENST00000523549 SFI1A8K8P3 1242 aa8.79□□□□□ -1
NSMCE2-211ENST00000523549 ALBP02768 609 aa8.79□□□□□ -1
NSMCE2-211ENST00000523549 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
NSMCE2-211ENST00000523549 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
NSMCE2-211ENST00000523549 SUSD3Q96L08 255 aa8.79□□□□□ -1
NSMCE2-211ENST00000523549 NID1P14543 1247 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 TYRO3Q06418 890 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
NSMCE2-211ENST00000523549 CEP63Q96MT8 703 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
NSMCE2-211ENST00000523549 ADH7P40394 386 aa8.77□□□□□ -1.01
NSMCE2-211ENST00000523549 C2orf49Q9BVC5 232 aaPredicted RBP8.77□□□□□ -1.01
NSMCE2-211ENST00000523549 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 PRRT3Q5FWE3 981 aa8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 NKAPLQ5M9Q1 402 aa8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 ALDH16A1Q8IZ83 802 aa8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
NSMCE2-211ENST00000523549 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
NSMCE2-211ENST00000523549 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
NSMCE2-211ENST00000523549 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
NSMCE2-211ENST00000523549 GAS2L2Q8NHY3 880 aa8.75□□□□□ -1.01
NSMCE2-211ENST00000523549 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
NSMCE2-211ENST00000523549 ILDR2Q71H61 639 aa8.74□□□□□ -1.01
NSMCE2-211ENST00000523549 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
NSMCE2-211ENST00000523549 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
NSMCE2-211ENST00000523549 BTLAQ7Z6A9 289 aa8.73□□□□□ -1.01
NSMCE2-211ENST00000523549 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
NSMCE2-211ENST00000523549 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms