RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
SDCBP-212ENST00000523483 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
SDCBP-212ENST00000523483 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
SDCBP-212ENST00000523483 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
SDCBP-212ENST00000523483 PCDHB15Q9Y5E8 787 aa11.75□□□□□ -0.53
SDCBP-212ENST00000523483 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
SDCBP-212ENST00000523483 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 ZBTB7BO15156 539 aaPredicted RBP11.74□□□□□ -0.53
SDCBP-212ENST00000523483 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
SDCBP-212ENST00000523483 HLFQ16534 295 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 NPHP1O15259 732 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
SDCBP-212ENST00000523483 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
SDCBP-212ENST00000523483 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
SDCBP-212ENST00000523483 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 ZBTB40Q9NUA8 1239 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
SDCBP-212ENST00000523483 BTAF1O14981 1849 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 A0A087WZG4 1122 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 SKAP1Q86WV1 359 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
SDCBP-212ENST00000523483 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
SDCBP-212ENST00000523483 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
SDCBP-212ENST00000523483 RFC4P35249 363 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
SDCBP-212ENST00000523483 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
SDCBP-212ENST00000523483 ZPR1O75312 459 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 SRCAPQ6ZRS2 3230 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
SDCBP-212ENST00000523483 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
SDCBP-212ENST00000523483 PROM2Q8N271 834 aa11.72□□□□□ -0.53
SDCBP-212ENST00000523483 MAP3K15Q6ZN16 1313 aa11.71□□□□□ -0.53
SDCBP-212ENST00000523483 NEURL1BA8MQ27 555 aa11.71□□□□□ -0.53
SDCBP-212ENST00000523483 GNAI2P04899 355 aa11.71□□□□□ -0.53
SDCBP-212ENST00000523483 GNAI3P08754 354 aa11.71□□□□□ -0.53
SDCBP-212ENST00000523483 COL15A1P39059 1388 aa11.71□□□□□ -0.53
SDCBP-212ENST00000523483 IGHDP01880 384 aa11.71□□□□□ -0.54
SDCBP-212ENST00000523483 GRM8O00222 908 aa11.71□□□□□ -0.54
SDCBP-212ENST00000523483 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.54
SDCBP-212ENST00000523483 TRAPPC3LQ5T215 181 aa11.71□□□□□ -0.54
SDCBP-212ENST00000523483 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.54
SDCBP-212ENST00000523483 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.54
SDCBP-212ENST00000523483 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
SDCBP-212ENST00000523483 BAG6P46379 1132 aa11.7□□□□□ -0.54
SDCBP-212ENST00000523483 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
SDCBP-212ENST00000523483 CWC25Q9NXE8 425 aaPredicted RBP11.7□□□□□ -0.54
SDCBP-212ENST00000523483 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
SDCBP-212ENST00000523483 GCKRQ14397 625 aa11.7□□□□□ -0.54
SDCBP-212ENST00000523483 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
SDCBP-212ENST00000523483 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
SDCBP-212ENST00000523483 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
SDCBP-212ENST00000523483 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
SDCBP-212ENST00000523483 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
SDCBP-212ENST00000523483 RGS3P49796 1198 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 TCIRG1Q13488 830 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
SDCBP-212ENST00000523483 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 PLSCR1O15162 318 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
SDCBP-212ENST00000523483 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
SDCBP-212ENST00000523483 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 MYH14Q7Z406 1995 aaKnown RBP11.67□□□□□ -0.54
SDCBP-212ENST00000523483 OS9Q13438 667 aaPredicted RBP11.67□□□□□ -0.54
SDCBP-212ENST00000523483 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
SDCBP-212ENST00000523483 LAMB4A4D0S4 1761 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 BICC1Q9H694 974 aaKnown RBP11.66□□□□□ -0.54
SDCBP-212ENST00000523483 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
SDCBP-212ENST00000523483 PPP1R42Q7Z4L9 355 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 SIL1Q9H173 461 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
SDCBP-212ENST00000523483 TJP1Q07157 1748 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 HMMRO75330 724 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 HCLS1P14317 486 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-212ENST00000523483 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 SETDB2Q96T68 719 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms