RNA–Protein interactions for RNA: ENST00000523204.1

AP3B1-208, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-208ENST00000523204 MMP16P51512 607 aa12.87□□□□□ -0.35
AP3B1-208ENST00000523204 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
AP3B1-208ENST00000523204 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
AP3B1-208ENST00000523204 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
AP3B1-208ENST00000523204 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
AP3B1-208ENST00000523204 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
AP3B1-208ENST00000523204 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
AP3B1-208ENST00000523204 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-208ENST00000523204 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
AP3B1-208ENST00000523204 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
AP3B1-208ENST00000523204 DDB1Q16531 1140 aa12.85□□□□□ -0.35
AP3B1-208ENST00000523204 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
AP3B1-208ENST00000523204 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
AP3B1-208ENST00000523204 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
AP3B1-208ENST00000523204 CHD4Q14839 1912 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 ALS2Q96Q42 1657 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 TTC24A2A3L6 582 aaPredicted RBP12.84□□□□□ -0.35
AP3B1-208ENST00000523204 AVPP01185 164 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 TRIM32Q13049 653 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
AP3B1-208ENST00000523204 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
AP3B1-208ENST00000523204 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 PRR36Q9H6K5 1346 aa12.84□□□□□ -0.35
AP3B1-208ENST00000523204 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
AP3B1-208ENST00000523204 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
AP3B1-208ENST00000523204 MAP3K5Q99683 1374 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 WNT7AO00755 349 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 HOXA2O43364 376 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 HLA-CQ95604 372 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
AP3B1-208ENST00000523204 AXIN1O15169 862 aa12.81□□□□□ -0.36
AP3B1-208ENST00000523204 POLD1P28340 1107 aa12.81□□□□□ -0.36
AP3B1-208ENST00000523204 CLCN1P35523 988 aa12.81□□□□□ -0.36
AP3B1-208ENST00000523204 CTC1Q2NKJ3 1217 aa12.81□□□□□ -0.36
AP3B1-208ENST00000523204 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
AP3B1-208ENST00000523204 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
AP3B1-208ENST00000523204 TOM1L2Q6ZVM7 507 aa12.79□□□□□ -0.36
AP3B1-208ENST00000523204 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
AP3B1-208ENST00000523204 NLGN2Q8NFZ4 835 aa12.79□□□□□ -0.36
AP3B1-208ENST00000523204 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
AP3B1-208ENST00000523204 ATP7BP35670 1465 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
AP3B1-208ENST00000523204 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
AP3B1-208ENST00000523204 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
AP3B1-208ENST00000523204 FAM217BQ9NTX9 383 aaPredicted RBP12.78□□□□□ -0.36
AP3B1-208ENST00000523204 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
AP3B1-208ENST00000523204 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 CRB1P82279 1406 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
AP3B1-208ENST00000523204 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
AP3B1-208ENST00000523204 SMCPP49901 116 aaPredicted RBP12.77□□□□□ -0.37
AP3B1-208ENST00000523204 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
AP3B1-208ENST00000523204 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
AP3B1-208ENST00000523204 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
AP3B1-208ENST00000523204 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
AP3B1-208ENST00000523204 MRGPRX2Q96LB1 330 aa12.76□□□□□ -0.37
AP3B1-208ENST00000523204 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
AP3B1-208ENST00000523204 COL5A2P05997 1499 aaPredicted RBP12.76□□□□□ -0.37
AP3B1-208ENST00000523204 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
AP3B1-208ENST00000523204 CPDO75976 1380 aa12.75□□□□□ -0.37
AP3B1-208ENST00000523204 REPIN1Q9BWE0 567 aaKnown RBP12.75□□□□□ -0.37
AP3B1-208ENST00000523204 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
AP3B1-208ENST00000523204 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
AP3B1-208ENST00000523204 SMPD1P17405 629 aa12.74□□□□□ -0.37
AP3B1-208ENST00000523204 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
AP3B1-208ENST00000523204 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
AP3B1-208ENST00000523204 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
AP3B1-208ENST00000523204 GMPR2Q9P2T1 348 aaKnown RBP12.74□□□□□ -0.37
AP3B1-208ENST00000523204 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
AP3B1-208ENST00000523204 JUNDP17535 347 aa12.73□□□□□ -0.37
AP3B1-208ENST00000523204 COL13A1Q5TAT6 717 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-208ENST00000523204 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
AP3B1-208ENST00000523204 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
AP3B1-208ENST00000523204 GCP02774 474 aa12.72□□□□□ -0.37
AP3B1-208ENST00000523204 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
AP3B1-208ENST00000523204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
AP3B1-208ENST00000523204 NLRP13Q86W25 1043 aa12.71□□□□□ -0.37
AP3B1-208ENST00000523204 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
AP3B1-208ENST00000523204 CDCA7Q9BWT1 371 aaPredicted RBP12.71□□□□□ -0.37
AP3B1-208ENST00000523204 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 USP19O94966 1318 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 ACEP12821 1306 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 EXOC5O00471 708 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 WNT7BP56706 349 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
AP3B1-208ENST00000523204 J3QL48 77 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 PRELPP51888 382 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 BCL9O00512 1426 aa12.69□□□□□ -0.38
AP3B1-208ENST00000523204 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
AP3B1-208ENST00000523204 TFCP2L1Q9NZI6 479 aa12.68□□□□□ -0.38
AP3B1-208ENST00000523204 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
AP3B1-208ENST00000523204 FDX1P10109 184 aa12.67□□□□□ -0.38
AP3B1-208ENST00000523204 SKOR1P84550 965 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms