RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 RASSF7Q02833 373 aa20.47■□□□□ 0.87
ARFGAP1-216ENST00000522959 KRT24Q2M2I5 525 aa20.47■□□□□ 0.87
ARFGAP1-216ENST00000522959 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
ARFGAP1-216ENST00000522959 LRP10Q7Z4F1 713 aa20.47■□□□□ 0.87
ARFGAP1-216ENST00000522959 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
ARFGAP1-216ENST00000522959 KIF3CO14782 793 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 PDIA6Q15084 440 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
ARFGAP1-216ENST00000522959 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
ARFGAP1-216ENST00000522959 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.86
ARFGAP1-216ENST00000522959 H0YIN7 160 aa20.45■□□□□ 0.86
ARFGAP1-216ENST00000522959 MYL6BP14649 208 aa20.45■□□□□ 0.86
ARFGAP1-216ENST00000522959 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
ARFGAP1-216ENST00000522959 ANXA1P04083 346 aa20.44■□□□□ 0.86
ARFGAP1-216ENST00000522959 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
ARFGAP1-216ENST00000522959 FAM177BA6PVY3 158 aa20.43■□□□□ 0.86
ARFGAP1-216ENST00000522959 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
ARFGAP1-216ENST00000522959 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
ARFGAP1-216ENST00000522959 NIP7Q9Y221 180 aaKnown RBP eCLIP20.43■□□□□ 0.86
ARFGAP1-216ENST00000522959 NFKBIEO00221 500 aa20.42■□□□□ 0.86
ARFGAP1-216ENST00000522959 CHL1O00533 1208 aa20.42■□□□□ 0.86
ARFGAP1-216ENST00000522959 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
ARFGAP1-216ENST00000522959 ZNF622Q969S3 477 aaKnown RBP eCLIP20.42■□□□□ 0.868e-8■■□□□ 12.6
ARFGAP1-216ENST00000522959 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
ARFGAP1-216ENST00000522959 SRGNP10124 158 aa20.41■□□□□ 0.86
ARFGAP1-216ENST00000522959 PDE6BP35913 854 aa20.41■□□□□ 0.86
ARFGAP1-216ENST00000522959 NMRK2Q9NPI5 230 aa20.41■□□□□ 0.86
ARFGAP1-216ENST00000522959 RNF181Q9P0P0 153 aa20.41■□□□□ 0.86
ARFGAP1-216ENST00000522959 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
ARFGAP1-216ENST00000522959 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
ARFGAP1-216ENST00000522959 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
ARFGAP1-216ENST00000522959 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
ARFGAP1-216ENST00000522959 NBPF5PQ86XG9 351 aaPredicted RBP20.4■□□□□ 0.86
ARFGAP1-216ENST00000522959 NECTIN2Q92692 538 aa20.4■□□□□ 0.86
ARFGAP1-216ENST00000522959 KLRG2A4D1S0 409 aaPredicted RBP20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 RGL2O15211 777 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 C21orf2O43822 256 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 ZBTB3Q9H5J0 574 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 BABAM1Q9NWV8 329 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 ANKRD36CQ5JPF3 1778 aa20.39■□□□□ 0.85
ARFGAP1-216ENST00000522959 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
ARFGAP1-216ENST00000522959 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
ARFGAP1-216ENST00000522959 APAF1O14727 1248 aa20.38■□□□□ 0.85
ARFGAP1-216ENST00000522959 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
ARFGAP1-216ENST00000522959 ABCC12Q96J65 1359 aa20.37■□□□□ 0.85
ARFGAP1-216ENST00000522959 ST5P78524 1137 aa20.37■□□□□ 0.85
ARFGAP1-216ENST00000522959 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
ARFGAP1-216ENST00000522959 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
ARFGAP1-216ENST00000522959 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
ARFGAP1-216ENST00000522959 LAMB2P55268 1798 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 GPTP24298 496 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 C7orf43Q8WVR3 580 aa20.36■□□□□ 0.85
ARFGAP1-216ENST00000522959 TAF1P21675 1872 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 SUSD4Q5VX71 490 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 MASTLQ96GX5 879 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
ARFGAP1-216ENST00000522959 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
ARFGAP1-216ENST00000522959 NPHP1O15259 732 aa20.34■□□□□ 0.85
ARFGAP1-216ENST00000522959 ZNF853P0CG23 659 aa20.34■□□□□ 0.85
ARFGAP1-216ENST00000522959 GIGYF2Q6Y7W6 1299 aaKnown RBP20.34■□□□□ 0.85
ARFGAP1-216ENST00000522959 LMNB1P20700 586 aa20.33■□□□□ 0.85
ARFGAP1-216ENST00000522959 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
ARFGAP1-216ENST00000522959 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
ARFGAP1-216ENST00000522959 NTSR2O95665 410 aa20.31■□□□□ 0.84
ARFGAP1-216ENST00000522959 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
ARFGAP1-216ENST00000522959 XAGE3Q8WTP9 111 aa20.31■□□□□ 0.84
ARFGAP1-216ENST00000522959 RRAGCQ9HB90 399 aa20.31■□□□□ 0.84
ARFGAP1-216ENST00000522959 NPR1P16066 1061 aa20.3■□□□□ 0.84
ARFGAP1-216ENST00000522959 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
ARFGAP1-216ENST00000522959 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
ARFGAP1-216ENST00000522959 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
ARFGAP1-216ENST00000522959 SNED1Q8TER0 1413 aa20.29■□□□□ 0.84
ARFGAP1-216ENST00000522959 POTECB2RU33 542 aa20.29■□□□□ 0.84
ARFGAP1-216ENST00000522959 CRY2Q49AN0 593 aa20.29■□□□□ 0.84
ARFGAP1-216ENST00000522959 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
ARFGAP1-216ENST00000522959 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
ARFGAP1-216ENST00000522959 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.83
ARFGAP1-216ENST00000522959 WDR90Q96KV7 1748 aa20.27■□□□□ 0.83
ARFGAP1-216ENST00000522959 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.83
ARFGAP1-216ENST00000522959 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 TOMM70O94826 608 aa20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 HSPA6P17066 643 aa20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-216ENST00000522959 NYXQ9GZU5 481 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms