RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PXDNLA1KZ92 1463 aa26.97■■□□□ 1.91
R3HCC1-208ENST00000522012 ZNF831Q5JPB2 1677 aa26.97■■□□□ 1.91
R3HCC1-208ENST00000522012 PLSCR1O15162 318 aa26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 EIF5P55010 431 aaKnown RBP26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 NEXNQ0ZGT2 675 aa26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 RC3H1Q5TC82 1133 aaKnown RBP26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 CCDC136Q96JN2 1154 aa26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 ZBTB40Q9NUA8 1239 aa26.96■■□□□ 1.91
R3HCC1-208ENST00000522012 TXNRD1Q16881 649 aa26.95■■□□□ 1.91
R3HCC1-208ENST00000522012 B4GALNT3Q6L9W6 998 aa26.95■■□□□ 1.91
R3HCC1-208ENST00000522012 MYD88Q99836 296 aa26.95■■□□□ 1.91
R3HCC1-208ENST00000522012 EP400Q96L91 3159 aa26.95■■□□□ 1.9
R3HCC1-208ENST00000522012 DZIP3Q86Y13 1208 aaKnown RBP26.94■■□□□ 1.9
R3HCC1-208ENST00000522012 LINS1Q8NG48 757 aa26.94■■□□□ 1.9
R3HCC1-208ENST00000522012 TBC1D2BQ9UPU7 963 aa26.94■■□□□ 1.9
R3HCC1-208ENST00000522012 ATP10DQ9P241 1426 aa26.94■■□□□ 1.9
R3HCC1-208ENST00000522012 LY75O60449 1722 aa26.93■■□□□ 1.9
R3HCC1-208ENST00000522012 PROM2Q8N271 834 aa26.93■■□□□ 1.9
R3HCC1-208ENST00000522012 MEIS3Q99687 375 aa26.93■■□□□ 1.9
R3HCC1-208ENST00000522012 GNPATO15228 680 aa26.92■■□□□ 1.9
R3HCC1-208ENST00000522012 ALDH1L1O75891 902 aa26.92■■□□□ 1.9
R3HCC1-208ENST00000522012 CWF19L2Q2TBE0 894 aaKnown RBP26.92■■□□□ 1.9
R3HCC1-208ENST00000522012 MAP3K15Q6ZN16 1313 aa26.92■■□□□ 1.9
R3HCC1-208ENST00000522012 RPS6KA4O75676 772 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 IGKV5-2P06315 115 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 AK7Q96M32 723 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 ATP5J2-PTCD1G3V325 749 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 C1orf115Q9H7X2 142 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 PCDHB15Q9Y5E8 787 aa26.9■■□□□ 1.9
R3HCC1-208ENST00000522012 COL5A3P25940 1745 aaPredicted RBP26.89■■□□□ 1.9
R3HCC1-208ENST00000522012 A0A087WZG4 1122 aa26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 GNAI3P08754 354 aa26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 HMGB2P26583 209 aaKnown RBP26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 USP44Q9H0E7 712 aa26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 RTCBQ9Y3I0 505 aaKnown RBP26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 COL15A1P39059 1388 aa26.89■■□□□ 1.89
R3HCC1-208ENST00000522012 RREB1Q92766 1687 aa26.88■■□□□ 1.89
R3HCC1-208ENST00000522012 NEURL1BA8MQ27 555 aa26.88■■□□□ 1.89
R3HCC1-208ENST00000522012 SF3B2Q13435 895 aaKnown RBP26.88■■□□□ 1.89
R3HCC1-208ENST00000522012 ERVV-1B6SEH8 477 aa26.87■■□□□ 1.89
R3HCC1-208ENST00000522012 HLFQ16534 295 aa26.87■■□□□ 1.89
R3HCC1-208ENST00000522012 SMIM5Q71RC9 77 aa26.87■■□□□ 1.89
R3HCC1-208ENST00000522012 C9orf78Q9NZ63 289 aaPredicted RBP26.87■■□□□ 1.89
R3HCC1-208ENST00000522012 TCIRG1Q13488 830 aa26.86■■□□□ 1.89
R3HCC1-208ENST00000522012 GIGYF2Q6Y7W6 1299 aaKnown RBP26.86■■□□□ 1.89
R3HCC1-208ENST00000522012 UBTFL1P0CB47 393 aaPredicted RBP26.85■■□□□ 1.89
R3HCC1-208ENST00000522012 GCKRQ14397 625 aa26.85■■□□□ 1.89
R3HCC1-208ENST00000522012 CAMTA2O94983 1202 aa26.84■■□□□ 1.89
R3HCC1-208ENST00000522012 GNAI2P04899 355 aa26.84■■□□□ 1.89
R3HCC1-208ENST00000522012 EN1Q05925 392 aaPredicted RBP26.84■■□□□ 1.89
R3HCC1-208ENST00000522012 HSP90AB3PQ58FF7 597 aa26.84■■□□□ 1.89
R3HCC1-208ENST00000522012 MYH14Q7Z406 1995 aaKnown RBP26.83■■□□□ 1.89
R3HCC1-208ENST00000522012 PHF14O94880 888 aa26.83■■□□□ 1.89
R3HCC1-208ENST00000522012 NBPF7P0C2Y1 421 aaPredicted RBP26.83■■□□□ 1.89
R3HCC1-208ENST00000522012 C4BP0C0L5 1744 aa26.83■■□□□ 1.88
R3HCC1-208ENST00000522012 TNS1Q9HBL0 1735 aaKnown RBP26.83■■□□□ 1.88
R3HCC1-208ENST00000522012 GRM8O00222 908 aa26.82■■□□□ 1.88
R3HCC1-208ENST00000522012 AMIGO3Q86WK7 504 aa26.82■■□□□ 1.88
R3HCC1-208ENST00000522012 ISCA1Q9BUE6 129 aa26.82■■□□□ 1.88
R3HCC1-208ENST00000522012 CWC25Q9NXE8 425 aaPredicted RBP26.82■■□□□ 1.88
R3HCC1-208ENST00000522012 SRCAPQ6ZRS2 3230 aa26.81■■□□□ 1.88
R3HCC1-208ENST00000522012 EZH2Q15910 746 aaKnown RBP26.81■■□□□ 1.88
R3HCC1-208ENST00000522012 TRAPPC3LQ5T215 181 aa26.81■■□□□ 1.88
R3HCC1-208ENST00000522012 ARHGEF1Q92888 912 aaKnown RBP26.81■■□□□ 1.88
R3HCC1-208ENST00000522012 ARFGEF2Q9Y6D5 1785 aa26.81■■□□□ 1.88
R3HCC1-208ENST00000522012 BAG6P46379 1132 aa26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 CCDC191Q8NCU4 936 aa26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 CAMKK2Q96RR4 588 aa26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 GPTP24298 496 aa26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 RWDD1Q9H446 243 aaPredicted RBP26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 LRRFIP2Q9Y608 721 aaKnown RBP26.8■■□□□ 1.88
R3HCC1-208ENST00000522012 ZPR1O75312 459 aa26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 IGHDP01880 384 aa26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 TRIM28Q13263 835 aaKnown RBP26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 NARFQ9UHQ1 456 aa26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 ZNF652Q9Y2D9 606 aa26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 IBTKQ9P2D0 1353 aaPredicted RBP26.79■■□□□ 1.88
R3HCC1-208ENST00000522012 NUP188Q5SRE5 1749 aa26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 UTYO14607 1347 aa26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 TAF1LQ8IZX4 1826 aa26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 RFC4P35249 363 aa26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 JARID2Q92833 1246 aaPredicted RBP26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 HDAC5Q9UQL6 1122 aa26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 N4BP2Q86UW6 1770 aaPredicted RBP26.78■■□□□ 1.88
R3HCC1-208ENST00000522012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.77■■□□□ 1.88
R3HCC1-208ENST00000522012 ADRA2BP18089 450 aa26.77■■□□□ 1.88
R3HCC1-208ENST00000522012 SRP68Q9UHB9 627 aaKnown RBP26.77■■□□□ 1.88
R3HCC1-208ENST00000522012 USPL1Q5W0Q7 1092 aa26.76■■□□□ 1.87
R3HCC1-208ENST00000522012 CEP85Q6P2H3 762 aa26.76■■□□□ 1.87
R3HCC1-208ENST00000522012 DEFB132Q7Z7B7 95 aa26.76■■□□□ 1.87
R3HCC1-208ENST00000522012 RPAP2Q8IXW5 612 aaPredicted RBP26.76■■□□□ 1.87
R3HCC1-208ENST00000522012 TFCP2L1Q9NZI6 479 aa26.76■■□□□ 1.87
R3HCC1-208ENST00000522012 SSFA2P28290 1259 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 ZNF827Q17R98 1081 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 CLEC4GQ6UXB4 293 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 UBE3BQ7Z3V4 1068 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 NLRP10Q86W26 655 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 ZNF34Q8IZ26 560 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 AKT1S1Q96B36 256 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 HDAC1Q13547 482 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms