RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 USP16Q9Y5T5 823 aa19.88■□□□□ 0.77
PRKDC-204ENST00000521331 SRGNP10124 158 aa19.87■□□□□ 0.77
PRKDC-204ENST00000521331 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
PRKDC-204ENST00000521331 TAOK3Q9H2K8 898 aa19.87■□□□□ 0.77
PRKDC-204ENST00000521331 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
PRKDC-204ENST00000521331 ANKRD31Q8N7Z5 1873 aa19.86■□□□□ 0.77
PRKDC-204ENST00000521331 TIAM2Q8IVF5 1701 aa19.85■□□□□ 0.77
PRKDC-204ENST00000521331 RGL2O15211 777 aa19.85■□□□□ 0.77
PRKDC-204ENST00000521331 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
PRKDC-204ENST00000521331 PRPF40BQ6NWY9 871 aaKnown RBP19.85■□□□□ 0.77
PRKDC-204ENST00000521331 MCM10Q7L590 875 aa19.85■□□□□ 0.77
PRKDC-204ENST00000521331 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
PRKDC-204ENST00000521331 POTECB2RU33 542 aa19.84■□□□□ 0.77
PRKDC-204ENST00000521331 COL11A2P13942 1736 aaPredicted RBP19.83■□□□□ 0.77
PRKDC-204ENST00000521331 PRAMEF22A3QJZ6 481 aa19.83■□□□□ 0.77
PRKDC-204ENST00000521331 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
PRKDC-204ENST00000521331 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
PRKDC-204ENST00000521331 NPR1P16066 1061 aa19.81■□□□□ 0.76
PRKDC-204ENST00000521331 TPTE2Q6XPS3 522 aa19.81■□□□□ 0.76
PRKDC-204ENST00000521331 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
PRKDC-204ENST00000521331 DCTN1Q14203 1278 aa19.8■□□□□ 0.76
PRKDC-204ENST00000521331 TAF7Q15545 349 aaPredicted RBP19.8■□□□□ 0.76
PRKDC-204ENST00000521331 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
PRKDC-204ENST00000521331 NIP7Q9Y221 180 aaKnown RBP eCLIP19.8■□□□□ 0.76
PRKDC-204ENST00000521331 FER1L6Q2WGJ9 1857 aa19.79■□□□□ 0.76
PRKDC-204ENST00000521331 NBPF26B4DH59 902 aa19.79■□□□□ 0.76
PRKDC-204ENST00000521331 NBPF10Q6P3W6 841 aaKnown RBP19.79■□□□□ 0.76
PRKDC-204ENST00000521331 NBPF15Q8N660 670 aa19.79■□□□□ 0.76
PRKDC-204ENST00000521331 C7orf43Q8WVR3 580 aa19.79■□□□□ 0.76
PRKDC-204ENST00000521331 DDNO94850 711 aaPredicted RBP19.78■□□□□ 0.76
PRKDC-204ENST00000521331 NEFMP07197 916 aa19.78■□□□□ 0.76
PRKDC-204ENST00000521331 CHADLQ6NUI6 762 aa19.78■□□□□ 0.76
PRKDC-204ENST00000521331 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.76
PRKDC-204ENST00000521331 COL13A1Q5TAT6 717 aaPredicted RBP19.77■□□□□ 0.76
PRKDC-204ENST00000521331 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
PRKDC-204ENST00000521331 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
PRKDC-204ENST00000521331 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRKDC-204ENST00000521331 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
PRKDC-204ENST00000521331 DICER1Q9UPY3 1922 aaKnown RBP19.75■□□□□ 0.75
PRKDC-204ENST00000521331 RTKN2Q8IZC4 609 aa19.75■□□□□ 0.75
PRKDC-204ENST00000521331 L3MBTL3Q96JM7 780 aaPredicted RBP19.75■□□□□ 0.75
PRKDC-204ENST00000521331 CREBZFQ9NS37 354 aa19.75■□□□□ 0.75
PRKDC-204ENST00000521331 GTF2E1P29083 439 aaPredicted RBP19.74■□□□□ 0.75
PRKDC-204ENST00000521331 ALDH1B1P30837 517 aa19.74■□□□□ 0.75
PRKDC-204ENST00000521331 ARFGEF2Q9Y6D5 1785 aa19.74■□□□□ 0.75
PRKDC-204ENST00000521331 PCNTO95613 3336 aa19.73■□□□□ 0.75
PRKDC-204ENST00000521331 FAM177BA6PVY3 158 aa19.73■□□□□ 0.75
PRKDC-204ENST00000521331 HSPA1AP0DMV8 641 aaKnown RBP19.73■□□□□ 0.75
PRKDC-204ENST00000521331 HSPA1BP0DMV9 641 aaKnown RBP19.73■□□□□ 0.75
PRKDC-204ENST00000521331 HLFQ16534 295 aa19.73■□□□□ 0.75
PRKDC-204ENST00000521331 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
PRKDC-204ENST00000521331 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
PRKDC-204ENST00000521331 ERVV-1B6SEH8 477 aa19.72■□□□□ 0.75
PRKDC-204ENST00000521331 LDHDQ86WU2 507 aa19.72■□□□□ 0.75
PRKDC-204ENST00000521331 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
PRKDC-204ENST00000521331 POTEIP0CG38 1075 aa19.71■□□□□ 0.75
PRKDC-204ENST00000521331 POTEJP0CG39 1038 aa19.71■□□□□ 0.75
PRKDC-204ENST00000521331 TNS4Q8IZW8 715 aa19.71■□□□□ 0.75
PRKDC-204ENST00000521331 TAF1DQ9H5J8 278 aaPredicted RBP19.71■□□□□ 0.75
PRKDC-204ENST00000521331 MAP3K15Q6ZN16 1313 aa19.7■□□□□ 0.74
PRKDC-204ENST00000521331 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
PRKDC-204ENST00000521331 CRY2Q49AN0 593 aa19.69■□□□□ 0.74
PRKDC-204ENST00000521331 KIF6Q6ZMV9 814 aa19.69■□□□□ 0.74
PRKDC-204ENST00000521331 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
PRKDC-204ENST00000521331 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
PRKDC-204ENST00000521331 IARSP41252 1262 aaKnown RBP19.68■□□□□ 0.74
PRKDC-204ENST00000521331 NFE2L2Q16236 605 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 OLFM4Q6UX06 510 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 SYNE4Q8N205 404 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 HACL1Q9UJ83 578 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 PASKQ96RG2 1323 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 ZNF541Q9H0D2 1346 aa19.68■□□□□ 0.74
PRKDC-204ENST00000521331 CACNA1SQ13698 1873 aa19.67■□□□□ 0.74
PRKDC-204ENST00000521331 CC2D2BQ6DHV5 1058 aa19.67■□□□□ 0.74
PRKDC-204ENST00000521331 PSMD1Q99460 953 aa19.67■□□□□ 0.74
PRKDC-204ENST00000521331 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
PRKDC-204ENST00000521331 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
PRKDC-204ENST00000521331 IBTKQ9P2D0 1353 aaPredicted RBP19.67■□□□□ 0.74
PRKDC-204ENST00000521331 LAMB4A4D0S4 1761 aa19.66■□□□□ 0.74
PRKDC-204ENST00000521331 FZD9O00144 591 aa19.66■□□□□ 0.74
PRKDC-204ENST00000521331 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
PRKDC-204ENST00000521331 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
PRKDC-204ENST00000521331 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
PRKDC-204ENST00000521331 SCN4AP35499 1836 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 EPHX2P34913 555 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 GRIPAP1Q4V328 841 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 EAPPQ56P03 285 aaPredicted RBP19.65■□□□□ 0.74
PRKDC-204ENST00000521331 TTLL7Q6ZT98 887 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 PNMA8AQ86V59 439 aaPredicted RBP19.65■□□□□ 0.74
PRKDC-204ENST00000521331 JDP2Q8WYK2 163 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
PRKDC-204ENST00000521331 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 RIC1Q4ADV7 1423 aa19.65■□□□□ 0.74
PRKDC-204ENST00000521331 MYL6BP14649 208 aa19.64■□□□□ 0.73
PRKDC-204ENST00000521331 HOXA10P31260 410 aaPredicted RBP19.64■□□□□ 0.73
PRKDC-204ENST00000521331 GPC2Q8N158 579 aa19.64■□□□□ 0.73
PRKDC-204ENST00000521331 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
PRKDC-204ENST00000521331 CNTNAP1P78357 1384 aa19.64■□□□□ 0.73
PRKDC-204ENST00000521331 KDM3BQ7LBC6 1761 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms