RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 RRAGCQ9HB90 399 aa26.03■■□□□ 1.76
PABPC1-215ENST00000520804 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
PABPC1-215ENST00000520804 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
PABPC1-215ENST00000520804 RGL2O15211 777 aa26.02■■□□□ 1.76
PABPC1-215ENST00000520804 APLP1P51693 650 aa26.02■■□□□ 1.76
PABPC1-215ENST00000520804 PNNQ9H307 717 aaKnown RBP26.02■■□□□ 1.76
PABPC1-215ENST00000520804 C21orf2O43822 256 aa26.01■■□□□ 1.75
PABPC1-215ENST00000520804 CCDC88AQ3V6T2 1871 aa26■■□□□ 1.75
PABPC1-215ENST00000520804 SRGNP10124 158 aa26■■□□□ 1.75
PABPC1-215ENST00000520804 STYK1Q6J9G0 422 aa26■■□□□ 1.75
PABPC1-215ENST00000520804 NBPF5PQ86XG9 351 aaPredicted RBP26■■□□□ 1.75
PABPC1-215ENST00000520804 CNKSR1Q969H4 720 aa26■■□□□ 1.75
PABPC1-215ENST00000520804 TIAM2Q8IVF5 1701 aa26■■□□□ 1.75
PABPC1-215ENST00000520804 MAPK8IP3Q9UPT6 1336 aa25.99■■□□□ 1.75
PABPC1-215ENST00000520804 ZNF219Q9P2Y4 722 aaPredicted RBP25.99■■□□□ 1.75
PABPC1-215ENST00000520804 FER1L6Q2WGJ9 1857 aa25.98■■□□□ 1.75
PABPC1-215ENST00000520804 GLTPD2A6NH11 291 aa25.98■■□□□ 1.75
PABPC1-215ENST00000520804 MASTLQ96GX5 879 aa25.98■■□□□ 1.75
PABPC1-215ENST00000520804 THUMPD2Q9BTF0 503 aaKnown RBP25.98■■□□□ 1.75
PABPC1-215ENST00000520804 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
PABPC1-215ENST00000520804 FSTL1Q12841 308 aa25.97■■□□□ 1.75
PABPC1-215ENST00000520804 RALBP1Q15311 655 aa25.97■■□□□ 1.75
PABPC1-215ENST00000520804 NIP7Q9Y221 180 aaKnown RBP eCLIP25.97■■□□□ 1.75
PABPC1-215ENST00000520804 SLX4Q8IY92 1834 aa25.96■■□□□ 1.75
PABPC1-215ENST00000520804 ARFGEF2Q9Y6D5 1785 aa25.96■■□□□ 1.75
PABPC1-215ENST00000520804 CACNA1SQ13698 1873 aa25.96■■□□□ 1.75
PABPC1-215ENST00000520804 HLFQ16534 295 aa25.95■■□□□ 1.74
PABPC1-215ENST00000520804 PRPF40BQ6NWY9 871 aaKnown RBP25.95■■□□□ 1.74
PABPC1-215ENST00000520804 TPTE2Q6XPS3 522 aa25.95■■□□□ 1.74
PABPC1-215ENST00000520804 LTBP3Q9NS15 1303 aa25.94■■□□□ 1.74
PABPC1-215ENST00000520804 DICER1Q9UPY3 1922 aaKnown RBP25.92■■□□□ 1.74
PABPC1-215ENST00000520804 KLRG2A4D1S0 409 aaPredicted RBP25.92■■□□□ 1.74
PABPC1-215ENST00000520804 VEGFAP15692 232 aaPredicted RBP25.92■■□□□ 1.74
PABPC1-215ENST00000520804 SOGA3Q5TF21 947 aa25.92■■□□□ 1.74
PABPC1-215ENST00000520804 TAOK3Q9H2K8 898 aa25.92■■□□□ 1.74
PABPC1-215ENST00000520804 WDR90Q96KV7 1748 aa25.91■■□□□ 1.74
PABPC1-215ENST00000520804 NPR1P16066 1061 aa25.91■■□□□ 1.74
PABPC1-215ENST00000520804 ERFEQ4G0M1 354 aa25.91■■□□□ 1.74
PABPC1-215ENST00000520804 NGEFQ8N5V2 710 aa25.91■■□□□ 1.74
PABPC1-215ENST00000520804 DNAJC5GQ8N7S2 189 aa25.91■■□□□ 1.74
PABPC1-215ENST00000520804 FAM177BA6PVY3 158 aa25.9■■□□□ 1.74
PABPC1-215ENST00000520804 ERVV-1B6SEH8 477 aa25.9■■□□□ 1.74
PABPC1-215ENST00000520804 SMC1BQ8NDV3 1235 aa25.9■■□□□ 1.74
PABPC1-215ENST00000520804 RRP7AQ9Y3A4 280 aaKnown RBP25.9■■□□□ 1.74
PABPC1-215ENST00000520804 DPY19L2Q6NUT2 758 aa25.89■■□□□ 1.74
PABPC1-215ENST00000520804 C7orf43Q8WVR3 580 aa25.89■■□□□ 1.74
PABPC1-215ENST00000520804 MAP3K15Q6ZN16 1313 aa25.88■■□□□ 1.73
PABPC1-215ENST00000520804 RIPK4P57078 832 aa25.88■■□□□ 1.73
PABPC1-215ENST00000520804 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
PABPC1-215ENST00000520804 NUP98P52948 1817 aa25.87■■□□□ 1.73
PABPC1-215ENST00000520804 MYL6BP14649 208 aa25.87■■□□□ 1.73
PABPC1-215ENST00000520804 KIF6Q6ZMV9 814 aa25.87■■□□□ 1.73
PABPC1-215ENST00000520804 TTLL7Q6ZT98 887 aa25.87■■□□□ 1.73
PABPC1-215ENST00000520804 TSPYL4Q9UJ04 414 aa25.87■■□□□ 1.73
PABPC1-215ENST00000520804 POTECB2RU33 542 aa25.86■■□□□ 1.73
PABPC1-215ENST00000520804 GTF2E1P29083 439 aaPredicted RBP25.86■■□□□ 1.73
PABPC1-215ENST00000520804 CCDC93Q567U6 631 aa25.86■■□□□ 1.73
PABPC1-215ENST00000520804 ERBB4Q15303 1308 aa25.86■■□□□ 1.73
PABPC1-215ENST00000520804 MYBBP1AQ9BQG0 1328 aaKnown RBP25.86■■□□□ 1.73
PABPC1-215ENST00000520804 TMPOP42166 694 aaKnown RBP25.85■■□□□ 1.73
PABPC1-215ENST00000520804 NYXQ9GZU5 481 aa25.85■■□□□ 1.73
PABPC1-215ENST00000520804 HTRA3P83110 453 aa25.84■■□□□ 1.73
PABPC1-215ENST00000520804 BABAM1Q9NWV8 329 aa25.84■■□□□ 1.73
PABPC1-215ENST00000520804 LMOD3Q0VAK6 560 aa25.83■■□□□ 1.73
PABPC1-215ENST00000520804 ZBTB3Q9H5J0 574 aa25.83■■□□□ 1.73
PABPC1-215ENST00000520804 ABCC12Q96J65 1359 aa25.82■■□□□ 1.72
PABPC1-215ENST00000520804 ALDH1B1P30837 517 aa25.82■■□□□ 1.72
PABPC1-215ENST00000520804 NUTM1Q86Y26 1132 aa25.82■■□□□ 1.72
PABPC1-215ENST00000520804 CRY2Q49AN0 593 aa25.81■■□□□ 1.72
PABPC1-215ENST00000520804 UBN2Q6ZU65 1347 aa25.81■■□□□ 1.72
PABPC1-215ENST00000520804 IBTKQ9P2D0 1353 aaPredicted RBP25.81■■□□□ 1.72
PABPC1-215ENST00000520804 GPTP24298 496 aa25.8■■□□□ 1.72
PABPC1-215ENST00000520804 FKBP4Q02790 459 aaKnown RBP eCLIP25.8■■□□□ 1.72
PABPC1-215ENST00000520804 DDNO94850 711 aaPredicted RBP25.79■■□□□ 1.72
PABPC1-215ENST00000520804 PDIA6Q15084 440 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 OLFM4Q6UX06 510 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 GIGYF2Q6Y7W6 1299 aaKnown RBP25.79■■□□□ 1.72
PABPC1-215ENST00000520804 LRP10Q7Z4F1 713 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 ZNF34Q8IZ26 560 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 RTKN2Q8IZC4 609 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 KLRG1Q96E93 195 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 RIC1Q4ADV7 1423 aa25.79■■□□□ 1.72
PABPC1-215ENST00000520804 EIF2S2P20042 333 aaKnown RBP25.78■■□□□ 1.72
PABPC1-215ENST00000520804 SUSD4Q5VX71 490 aa25.78■■□□□ 1.72
PABPC1-215ENST00000520804 CCDC146Q8IYE0 955 aa25.78■■□□□ 1.72
PABPC1-215ENST00000520804 IFFO2Q5TF58 517 aa25.76■■□□□ 1.71
PABPC1-215ENST00000520804 ZNF277Q9NRM2 450 aaPredicted RBP25.76■■□□□ 1.71
PABPC1-215ENST00000520804 NTSR2O95665 410 aa25.75■■□□□ 1.71
PABPC1-215ENST00000520804 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
PABPC1-215ENST00000520804 PROSER3Q2NL68 480 aa25.75■■□□□ 1.71
PABPC1-215ENST00000520804 RUNDC1Q96C34 613 aa25.75■■□□□ 1.71
PABPC1-215ENST00000520804 SNED1Q8TER0 1413 aa25.74■■□□□ 1.71
PABPC1-215ENST00000520804 HOXA10P31260 410 aaPredicted RBP25.74■■□□□ 1.71
PABPC1-215ENST00000520804 WDR43Q15061 677 aaKnown RBP eCLIP25.74■■□□□ 1.71
PABPC1-215ENST00000520804 JMYQ8N9B5 988 aa25.74■■□□□ 1.71
PABPC1-215ENST00000520804 ANXA1P04083 346 aa25.73■■□□□ 1.71
PABPC1-215ENST00000520804 PARP10Q53GL7 1025 aa25.73■■□□□ 1.71
PABPC1-215ENST00000520804 PPP1R42Q7Z4L9 355 aa25.73■■□□□ 1.71
PABPC1-215ENST00000520804 SYNE4Q8N205 404 aa25.73■■□□□ 1.71
PABPC1-215ENST00000520804 RPGRQ92834 1020 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms