RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 PRAMEF22A3QJZ6 481 aa26.76■■□□□ 1.87
HDAC2-207ENST00000520170 MCM10Q7L590 875 aa26.76■■□□□ 1.87
HDAC2-207ENST00000520170 ST5P78524 1137 aa26.75■■□□□ 1.87
HDAC2-207ENST00000520170 DPY19L2Q6NUT2 758 aa26.75■■□□□ 1.87
HDAC2-207ENST00000520170 PPP2R1AP30153 589 aa26.74■■□□□ 1.87
HDAC2-207ENST00000520170 ERFEQ4G0M1 354 aa26.74■■□□□ 1.87
HDAC2-207ENST00000520170 PCNTO95613 3336 aa26.73■■□□□ 1.87
HDAC2-207ENST00000520170 SNRPA1P09661 255 aaKnown RBP26.73■■□□□ 1.87
HDAC2-207ENST00000520170 JMYQ8N9B5 988 aa26.73■■□□□ 1.87
HDAC2-207ENST00000520170 CNKSR1Q969H4 720 aa26.73■■□□□ 1.87
HDAC2-207ENST00000520170 DCTN1Q14203 1278 aa26.72■■□□□ 1.87
HDAC2-207ENST00000520170 POTECB2RU33 542 aa26.71■■□□□ 1.87
HDAC2-207ENST00000520170 SRGNP10124 158 aa26.71■■□□□ 1.87
HDAC2-207ENST00000520170 STYK1Q6J9G0 422 aa26.71■■□□□ 1.87
HDAC2-207ENST00000520170 PRPF40BQ6NWY9 871 aaKnown RBP26.7■■□□□ 1.86
HDAC2-207ENST00000520170 NBPF5PQ86XG9 351 aaPredicted RBP26.7■■□□□ 1.86
HDAC2-207ENST00000520170 MASTLQ96GX5 879 aa26.7■■□□□ 1.86
HDAC2-207ENST00000520170 TAOK3Q9H2K8 898 aa26.7■■□□□ 1.86
HDAC2-207ENST00000520170 CLEC4GQ6UXB4 293 aa26.69■■□□□ 1.86
HDAC2-207ENST00000520170 ZNF652Q9Y2D9 606 aa26.69■■□□□ 1.86
HDAC2-207ENST00000520170 ARFGEF2Q9Y6D5 1785 aa26.69■■□□□ 1.86
HDAC2-207ENST00000520170 LTBP3Q9NS15 1303 aa26.67■■□□□ 1.86
HDAC2-207ENST00000520170 NBPF26B4DH59 902 aa26.65■■□□□ 1.86
HDAC2-207ENST00000520170 HTATSF1O43719 755 aaKnown RBP26.65■■□□□ 1.86
HDAC2-207ENST00000520170 SOGA3Q5TF21 947 aa26.65■■□□□ 1.86
HDAC2-207ENST00000520170 NBPF10Q6P3W6 841 aaKnown RBP26.65■■□□□ 1.86
HDAC2-207ENST00000520170 NBPF15Q8N660 670 aa26.65■■□□□ 1.86
HDAC2-207ENST00000520170 FAM177BA6PVY3 158 aa26.64■■□□□ 1.86
HDAC2-207ENST00000520170 DDNO94850 711 aaPredicted RBP26.64■■□□□ 1.86
HDAC2-207ENST00000520170 TAF7Q15545 349 aaPredicted RBP26.64■■□□□ 1.86
HDAC2-207ENST00000520170 MIS18AQ9NYP9 233 aa26.64■■□□□ 1.86
HDAC2-207ENST00000520170 NIP7Q9Y221 180 aaKnown RBP eCLIP26.64■■□□□ 1.86
HDAC2-207ENST00000520170 DLG5Q8TDM6 1919 aa26.63■■□□□ 1.85
HDAC2-207ENST00000520170 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
HDAC2-207ENST00000520170 COL13A1Q5TAT6 717 aaPredicted RBP26.62■■□□□ 1.85
HDAC2-207ENST00000520170 NPR1P16066 1061 aa26.61■■□□□ 1.85
HDAC2-207ENST00000520170 CCDC93Q567U6 631 aa26.6■■□□□ 1.85
HDAC2-207ENST00000520170 C7orf43Q8WVR3 580 aa26.6■■□□□ 1.85
HDAC2-207ENST00000520170 HLFQ16534 295 aa26.59■■□□□ 1.85
HDAC2-207ENST00000520170 NEFMP07197 916 aa26.58■■□□□ 1.85
HDAC2-207ENST00000520170 CHADLQ6NUI6 762 aa26.58■■□□□ 1.85
HDAC2-207ENST00000520170 NGEFQ8N5V2 710 aa26.58■■□□□ 1.85
HDAC2-207ENST00000520170 LAMB4A4D0S4 1761 aa26.58■■□□□ 1.85
HDAC2-207ENST00000520170 KLRG2A4D1S0 409 aaPredicted RBP26.57■■□□□ 1.84
HDAC2-207ENST00000520170 RGL2O15211 777 aa26.57■■□□□ 1.84
HDAC2-207ENST00000520170 POTEIP0CG38 1075 aa26.57■■□□□ 1.84
HDAC2-207ENST00000520170 POTEJP0CG39 1038 aa26.57■■□□□ 1.84
HDAC2-207ENST00000520170 GTF2E1P29083 439 aaPredicted RBP26.57■■□□□ 1.84
HDAC2-207ENST00000520170 NUP98P52948 1817 aa26.56■■□□□ 1.84
HDAC2-207ENST00000520170 OLFM4Q6UX06 510 aa26.56■■□□□ 1.84
HDAC2-207ENST00000520170 FKBP4Q02790 459 aaKnown RBP eCLIP26.55■■□□□ 1.84
HDAC2-207ENST00000520170 ZNF277Q9NRM2 450 aaPredicted RBP26.55■■□□□ 1.84
HDAC2-207ENST00000520170 KDM3BQ7LBC6 1761 aa26.54■■□□□ 1.84
HDAC2-207ENST00000520170 SCN4AP35499 1836 aa26.54■■□□□ 1.84
HDAC2-207ENST00000520170 HSPA1AP0DMV8 641 aaKnown RBP26.53■■□□□ 1.84
HDAC2-207ENST00000520170 HSPA1BP0DMV9 641 aaKnown RBP26.53■■□□□ 1.84
HDAC2-207ENST00000520170 PNISRQ8TF01 805 aaKnown RBP26.53■■□□□ 1.84
HDAC2-207ENST00000520170 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
HDAC2-207ENST00000520170 IQCA1LA6NCM1 817 aa26.52■■□□□ 1.84
HDAC2-207ENST00000520170 RTKN2Q8IZC4 609 aa26.52■■□□□ 1.84
HDAC2-207ENST00000520170 ALDH1B1P30837 517 aa26.51■■□□□ 1.83
HDAC2-207ENST00000520170 THUMPD2Q9BTF0 503 aaKnown RBP26.51■■□□□ 1.83
HDAC2-207ENST00000520170 NUTM1Q86Y26 1132 aa26.5■■□□□ 1.83
HDAC2-207ENST00000520170 TNS4Q8IZW8 715 aa26.5■■□□□ 1.83
HDAC2-207ENST00000520170 L3MBTL3Q96JM7 780 aaPredicted RBP26.5■■□□□ 1.83
HDAC2-207ENST00000520170 TAF1DQ9H5J8 278 aaPredicted RBP26.5■■□□□ 1.83
HDAC2-207ENST00000520170 CREBZFQ9NS37 354 aa26.5■■□□□ 1.83
HDAC2-207ENST00000520170 ZNF541Q9H0D2 1346 aa26.49■■□□□ 1.83
HDAC2-207ENST00000520170 MYL6BP14649 208 aa26.49■■□□□ 1.83
HDAC2-207ENST00000520170 EIF4A1P60842 406 aaKnown RBP26.49■■□□□ 1.83
HDAC2-207ENST00000520170 TTLL7Q6ZT98 887 aa26.49■■□□□ 1.83
HDAC2-207ENST00000520170 PLEKHF1Q96S99 279 aa26.49■■□□□ 1.83
HDAC2-207ENST00000520170 NYXQ9GZU5 481 aa26.49■■□□□ 1.83
HDAC2-207ENST00000520170 MKRN1Q9UHC7 482 aaKnown RBP26.49■■□□□ 1.83
HDAC2-207ENST00000520170 MAP3K15Q6ZN16 1313 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 ERVV-1B6SEH8 477 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 KIF6Q6ZMV9 814 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 LDHDQ86WU2 507 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 SYNE4Q8N205 404 aa26.48■■□□□ 1.83
HDAC2-207ENST00000520170 CAPN15O75808 1086 aa26.47■■□□□ 1.83
HDAC2-207ENST00000520170 EAPPQ56P03 285 aaPredicted RBP26.47■■□□□ 1.83
HDAC2-207ENST00000520170 ABCC12Q96J65 1359 aa26.46■■□□□ 1.83
HDAC2-207ENST00000520170 GPTP24298 496 aa26.46■■□□□ 1.83
HDAC2-207ENST00000520170 IARSP41252 1262 aaKnown RBP26.46■■□□□ 1.83
HDAC2-207ENST00000520170 ZBTB3Q9H5J0 574 aa26.45■■□□□ 1.82
HDAC2-207ENST00000520170 HACL1Q9UJ83 578 aa26.45■■□□□ 1.82
HDAC2-207ENST00000520170 MAPK8IP3Q9UPT6 1336 aa26.44■■□□□ 1.82
HDAC2-207ENST00000520170 CRY2Q49AN0 593 aa26.44■■□□□ 1.82
HDAC2-207ENST00000520170 RPGRQ92834 1020 aaKnown RBP26.44■■□□□ 1.82
HDAC2-207ENST00000520170 CLEC11AQ9Y240 323 aa26.44■■□□□ 1.82
HDAC2-207ENST00000520170 PNNQ9H307 717 aaKnown RBP26.43■■□□□ 1.82
HDAC2-207ENST00000520170 PASKQ96RG2 1323 aa26.42■■□□□ 1.82
HDAC2-207ENST00000520170 UBN2Q6ZU65 1347 aa26.41■■□□□ 1.82
HDAC2-207ENST00000520170 FZD9O00144 591 aa26.41■■□□□ 1.82
HDAC2-207ENST00000520170 EPHX2P34913 555 aa26.41■■□□□ 1.82
HDAC2-207ENST00000520170 SUSD4Q5VX71 490 aa26.41■■□□□ 1.82
HDAC2-207ENST00000520170 RNF123Q5XPI4 1314 aa26.4■■□□□ 1.82
HDAC2-207ENST00000520170 JDP2Q8WYK2 163 aa26.4■■□□□ 1.82
HDAC2-207ENST00000520170 PSMD1Q99460 953 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms