RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 PROSER3Q2NL68 480 aa29.1■■■□□ 2.25
SKP1-206ENST00000519321 ANXA1P04083 346 aa29.09■■■□□ 2.25
SKP1-206ENST00000519321 STK31Q9BXU1 1019 aa29.09■■■□□ 2.25
SKP1-206ENST00000519321 MAP3K15Q6ZN16 1313 aa29.09■■■□□ 2.25
SKP1-206ENST00000519321 TTLL7Q6ZT98 887 aa29.08■■■□□ 2.25
SKP1-206ENST00000519321 VAMP4O75379 141 aa29.07■■■□□ 2.24
SKP1-206ENST00000519321 NFIXQ14938 502 aa29.07■■■□□ 2.24
SKP1-206ENST00000519321 COPS6Q7L5N1 327 aa29.07■■■□□ 2.24
SKP1-206ENST00000519321 XAGE3Q8WTP9 111 aa29.06■■■□□ 2.24
SKP1-206ENST00000519321 AIMP1Q12904 312 aaKnown RBP29.05■■■□□ 2.24
SKP1-206ENST00000519321 TBC1D9BQ66K14 1250 aa29.05■■■□□ 2.24
SKP1-206ENST00000519321 TRMT2AQ8IZ69 625 aaKnown RBP29.05■■■□□ 2.24
SKP1-206ENST00000519321 CDCA7LQ96GN5 454 aa29.05■■■□□ 2.24
SKP1-206ENST00000519321 SETDB2Q96T68 719 aa29.05■■■□□ 2.24
SKP1-206ENST00000519321 POLRMTO00411 1230 aaKnown RBP29.04■■■□□ 2.24
SKP1-206ENST00000519321 FHDC1Q9C0D6 1143 aaPredicted RBP29.04■■■□□ 2.24
SKP1-206ENST00000519321 CD2APQ9Y5K6 639 aa29.04■■■□□ 2.24
SKP1-206ENST00000519321 DDR1Q08345 913 aa29.03■■■□□ 2.24
SKP1-206ENST00000519321 BICDL1Q6ZP65 573 aa29.03■■■□□ 2.24
SKP1-206ENST00000519321 ZBTB3Q9H5J0 574 aa29.03■■■□□ 2.24
SKP1-206ENST00000519321 CARMIL3Q8ND23 1372 aa29.02■■■□□ 2.24
SKP1-206ENST00000519321 ZBED9Q6R2W3 1325 aa29.02■■■□□ 2.24
SKP1-206ENST00000519321 KLHL34Q8N239 644 aa29.02■■■□□ 2.24
SKP1-206ENST00000519321 HLFQ16534 295 aa29.01■■■□□ 2.23
SKP1-206ENST00000519321 GIGYF2Q6Y7W6 1299 aaKnown RBP29.01■■■□□ 2.23
SKP1-206ENST00000519321 SYT17Q9BSW7 474 aa29.01■■■□□ 2.23
SKP1-206ENST00000519321 SERPINB2P05120 415 aa29■■■□□ 2.23
SKP1-206ENST00000519321 HSP90AB3PQ58FF7 597 aa29■■■□□ 2.23
SKP1-206ENST00000519321 ANKRD13DQ6ZTN6 518 aa29■■■□□ 2.23
SKP1-206ENST00000519321 PLBD2Q8NHP8 589 aa29■■■□□ 2.23
SKP1-206ENST00000519321 NUP98P52948 1817 aa28.99■■■□□ 2.23
SKP1-206ENST00000519321 DDX58O95786 925 aaKnown RBP28.99■■■□□ 2.23
SKP1-206ENST00000519321 ZNF428Q96B54 188 aa28.99■■■□□ 2.23
SKP1-206ENST00000519321 NIP7Q9Y221 180 aaKnown RBP eCLIP28.99■■■□□ 2.23
SKP1-206ENST00000519321 ATP10DQ9P241 1426 aa28.99■■■□□ 2.23
SKP1-206ENST00000519321 SLC4A2P04920 1241 aa28.98■■■□□ 2.23
SKP1-206ENST00000519321 CT47B1P0C2W7 299 aaPredicted RBP28.98■■■□□ 2.23
SKP1-206ENST00000519321 CACNA1FO60840 1977 aa28.98■■■□□ 2.23
SKP1-206ENST00000519321 PHAXQ9H814 394 aaKnown RBP28.97■■■□□ 2.23
SKP1-206ENST00000519321 C10orf71Q711Q0 1435 aa28.96■■■□□ 2.23
SKP1-206ENST00000519321 TCERG1O14776 1098 aaKnown RBP28.96■■■□□ 2.23
SKP1-206ENST00000519321 NRXN2Q9P2S2 1712 aa28.96■■■□□ 2.23
SKP1-206ENST00000519321 AFDNP55196 1824 aaKnown RBP28.94■■■□□ 2.22
SKP1-206ENST00000519321 NPHP1O15259 732 aa28.94■■■□□ 2.22
SKP1-206ENST00000519321 RIC3Q7Z5B4 369 aa28.94■■■□□ 2.22
SKP1-206ENST00000519321 ZNF34Q8IZ26 560 aa28.94■■■□□ 2.22
SKP1-206ENST00000519321 SRCAPQ6ZRS2 3230 aa28.94■■■□□ 2.22
SKP1-206ENST00000519321 KIF13BQ9NQT8 1826 aa28.93■■■□□ 2.22
SKP1-206ENST00000519321 PARP10Q53GL7 1025 aa28.93■■■□□ 2.22
SKP1-206ENST00000519321 NBPF5PQ86XG9 351 aaPredicted RBP28.93■■■□□ 2.22
SKP1-206ENST00000519321 TGFB2P61812 414 aa28.92■■■□□ 2.22
SKP1-206ENST00000519321 TCIRG1Q13488 830 aa28.92■■■□□ 2.22
SKP1-206ENST00000519321 TPTE2Q6XPS3 522 aa28.92■■■□□ 2.22
SKP1-206ENST00000519321 CNBD1Q8NA66 436 aa28.92■■■□□ 2.22
SKP1-206ENST00000519321 NYXQ9GZU5 481 aa28.92■■■□□ 2.22
SKP1-206ENST00000519321 ST5P78524 1137 aa28.91■■■□□ 2.22
SKP1-206ENST00000519321 ANKRD36CQ5JPF3 1778 aa28.9■■■□□ 2.22
SKP1-206ENST00000519321 IBTKQ9P2D0 1353 aaPredicted RBP28.9■■■□□ 2.22
SKP1-206ENST00000519321 GPTP24298 496 aa28.9■■■□□ 2.22
SKP1-206ENST00000519321 FLIIQ13045 1269 aa28.9■■■□□ 2.22
SKP1-206ENST00000519321 PRR5LQ6MZQ0 368 aa28.9■■■□□ 2.22
SKP1-206ENST00000519321 KSR2Q6VAB6 950 aa28.89■■■□□ 2.22
SKP1-206ENST00000519321 PPP1R42Q7Z4L9 355 aa28.89■■■□□ 2.22
SKP1-206ENST00000519321 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
SKP1-206ENST00000519321 ALDH1L2Q3SY69 923 aa28.88■■■□□ 2.21
SKP1-206ENST00000519321 G2E3Q7L622 706 aa28.88■■■□□ 2.21
SKP1-206ENST00000519321 NLGN2Q8NFZ4 835 aa28.88■■■□□ 2.21
SKP1-206ENST00000519321 GTF2E1P29083 439 aaPredicted RBP28.87■■■□□ 2.21
SKP1-206ENST00000519321 PDZRN3Q9UPQ7 1066 aa28.87■■■□□ 2.21
SKP1-206ENST00000519321 UBN2Q6ZU65 1347 aa28.87■■■□□ 2.21
SKP1-206ENST00000519321 DCAF8L1A6NGE4 600 aa28.86■■■□□ 2.21
SKP1-206ENST00000519321 FKBP5Q13451 457 aaPredicted RBP28.86■■■□□ 2.21
SKP1-206ENST00000519321 BRIP1Q9BX63 1249 aa28.86■■■□□ 2.21
SKP1-206ENST00000519321 RNF123Q5XPI4 1314 aa28.86■■■□□ 2.21
SKP1-206ENST00000519321 PI4KAP2A4QPH2 592 aa28.85■■■□□ 2.21
SKP1-206ENST00000519321 FAM177BA6PVY3 158 aa28.85■■■□□ 2.21
SKP1-206ENST00000519321 TRIM28Q13263 835 aaKnown RBP28.85■■■□□ 2.21
SKP1-206ENST00000519321 PI4KAP1Q8N8J0 262 aa28.85■■■□□ 2.21
SKP1-206ENST00000519321 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
SKP1-206ENST00000519321 METTL22Q9BUU2 404 aaPredicted RBP28.85■■■□□ 2.21
SKP1-206ENST00000519321 MAP3K2Q9Y2U5 619 aa28.85■■■□□ 2.21
SKP1-206ENST00000519321 PDE6BP35913 854 aa28.84■■■□□ 2.21
SKP1-206ENST00000519321 SUSD4Q5VX71 490 aa28.84■■■□□ 2.21
SKP1-206ENST00000519321 NLRP10Q86W26 655 aa28.84■■■□□ 2.21
SKP1-206ENST00000519321 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
SKP1-206ENST00000519321 NEXNQ0ZGT2 675 aa28.83■■■□□ 2.21
SKP1-206ENST00000519321 SSH1Q8WYL5 1049 aa28.83■■■□□ 2.21
SKP1-206ENST00000519321 PXDNLA1KZ92 1463 aa28.83■■■□□ 2.21
SKP1-206ENST00000519321 MRPL50Q8N5N7 158 aaKnown RBP28.82■■■□□ 2.2
SKP1-206ENST00000519321 MYD88Q99836 296 aa28.82■■■□□ 2.2
SKP1-206ENST00000519321 ADCY9O60503 1353 aa28.81■■■□□ 2.2
SKP1-206ENST00000519321 NTSR2O95665 410 aa28.81■■■□□ 2.2
SKP1-206ENST00000519321 ATP5J2-PTCD1G3V325 749 aa28.8■■■□□ 2.2
SKP1-206ENST00000519321 DPEP1P16444 411 aa28.8■■■□□ 2.2
SKP1-206ENST00000519321 SMC4Q9NTJ3 1288 aa28.8■■■□□ 2.2
SKP1-206ENST00000519321 KIAA1551Q9HCM1 1747 aa28.8■■■□□ 2.2
SKP1-206ENST00000519321 H0YIN7 160 aa28.79■■■□□ 2.2
SKP1-206ENST00000519321 CCDC24Q8N4L8 307 aa28.79■■■□□ 2.2
SKP1-206ENST00000519321 CCDC191Q8NCU4 936 aa28.79■■■□□ 2.2
SKP1-206ENST00000519321 DNAAF4Q8WXU2 420 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms