RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 CCDC61Q9Y6R9 512 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 PUS10Q3MIT2 529 aaKnown RBP6.69□□□□□ -1.34
AP3B1-204ENST00000519295 NFATC2IPQ8NCF5 419 aa6.69□□□□□ -1.34
AP3B1-204ENST00000519295 AKT1S1Q96B36 256 aa6.69□□□□□ -1.34
AP3B1-204ENST00000519295 RANBP17Q9H2T7 1088 aaKnown RBP6.69□□□□□ -1.34
AP3B1-204ENST00000519295 KIAA1522Q9P206 1035 aaPredicted RBP6.69□□□□□ -1.34
AP3B1-204ENST00000519295 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
AP3B1-204ENST00000519295 SMARCA5O60264 1052 aaPredicted RBP6.69□□□□□ -1.34
AP3B1-204ENST00000519295 NKX1-1Q15270 411 aaPredicted RBP6.68□□□□□ -1.34
AP3B1-204ENST00000519295 C8orf37Q96NL8 207 aa6.68□□□□□ -1.34
AP3B1-204ENST00000519295 NBPF8Q3BBV2 869 aa6.68□□□□□ -1.34
AP3B1-204ENST00000519295 MEX3CQ5U5Q3 659 aaKnown RBP6.68□□□□□ -1.34
AP3B1-204ENST00000519295 ZBTB9Q96C00 473 aa6.68□□□□□ -1.34
AP3B1-204ENST00000519295 NUDT16Q96DE0 195 aaKnown RBP6.68□□□□□ -1.34
AP3B1-204ENST00000519295 RIC1Q4ADV7 1423 aa6.68□□□□□ -1.34
AP3B1-204ENST00000519295 SCN4AP35499 1836 aa6.68□□□□□ -1.34
AP3B1-204ENST00000519295 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
AP3B1-204ENST00000519295 CCER2I3L3R5 266 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 PTMSP20962 102 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
AP3B1-204ENST00000519295 TATDN2Q93075 761 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 ACEP12821 1306 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 MEGF6O75095 1541 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 NPC1L1Q9UHC9 1359 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 EIF5P55010 431 aaKnown RBP6.67□□□□□ -1.34
AP3B1-204ENST00000519295 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 ARMCX6Q7L4S7 300 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 A0A1W2PP64 1363 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 A0A1B0GUL6 1792 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 PAPPA2Q9BXP8 1791 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 RGL2O15211 777 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 GET4Q7L5D6 327 aaPredicted RBP6.67□□□□□ -1.34
AP3B1-204ENST00000519295 TCP11L2Q8N4U5 519 aa6.67□□□□□ -1.34
AP3B1-204ENST00000519295 PROCA1Q8NCQ7 364 aaPredicted RBP6.67□□□□□ -1.34
AP3B1-204ENST00000519295 GIGYF1O75420 1035 aaPredicted RBP6.66□□□□□ -1.34
AP3B1-204ENST00000519295 EVA1CP58658 441 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 ZNF280DQ6N043 979 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 KCNH5Q8NCM2 988 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 CEP83Q9Y592 693 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 CAPN15O75808 1086 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 TERF1P54274 439 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 GSCP56915 257 aaPredicted RBP6.66□□□□□ -1.34
AP3B1-204ENST00000519295 TSNAXIP1Q2TAA8 658 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
AP3B1-204ENST00000519295 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.34
AP3B1-204ENST00000519295 BAG6P46379 1132 aa6.65□□□□□ -1.34
AP3B1-204ENST00000519295 CCDC82Q8N4S0 544 aa6.65□□□□□ -1.34
AP3B1-204ENST00000519295 TESK2Q96S53 571 aa6.65□□□□□ -1.34
AP3B1-204ENST00000519295 MYH14Q7Z406 1995 aaKnown RBP6.65□□□□□ -1.34
AP3B1-204ENST00000519295 MAP4K4O95819 1239 aaPredicted RBP6.65□□□□□ -1.35
AP3B1-204ENST00000519295 PAX7P23759 505 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 POLD1P28340 1107 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 ITGAEP38570 1179 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 SLC27A3Q5K4L6 730 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 PROM2Q8N271 834 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 SLC16A10Q8TF71 515 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 RBM33Q96EV2 1170 aaKnown RBP6.65□□□□□ -1.35
AP3B1-204ENST00000519295 ZNF232Q9UNY5 417 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 PCDHGA4Q9Y5G9 962 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 SNED1Q8TER0 1413 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 E9PSI1 815 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 BBOX1O75936 387 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 GSE1Q14687 1217 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 CASC1Q6TDU7 716 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 TTC21BQ7Z4L5 1316 aa6.65□□□□□ -1.35
AP3B1-204ENST00000519295 HOXA10P31260 410 aaPredicted RBP6.64□□□□□ -1.35
AP3B1-204ENST00000519295 UBA5Q9GZZ9 404 aa6.64□□□□□ -1.35
AP3B1-204ENST00000519295 PKN1Q16512 942 aa6.64□□□□□ -1.35
AP3B1-204ENST00000519295 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
AP3B1-204ENST00000519295 NOM1Q5C9Z4 860 aaKnown RBP6.64□□□□□ -1.35
AP3B1-204ENST00000519295 FRAT1Q92837 279 aaPredicted RBP6.64□□□□□ -1.35
AP3B1-204ENST00000519295 MMTAG2Q9BU76 263 aaKnown RBP6.64□□□□□ -1.35
AP3B1-204ENST00000519295 CDK19Q9BWU1 502 aa6.64□□□□□ -1.35
AP3B1-204ENST00000519295 FAM13BQ9NYF5 915 aa6.64□□□□□ -1.35
AP3B1-204ENST00000519295 ADRA2BP18089 450 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 RBM5P52756 815 aaKnown RBP eCLIP6.63□□□□□ -1.35
AP3B1-204ENST00000519295 GTPBP4Q9BZE4 634 aaKnown RBP6.63□□□□□ -1.35
AP3B1-204ENST00000519295 DHX16O60231 1041 aaKnown RBP6.63□□□□□ -1.35
AP3B1-204ENST00000519295 C4orf46Q504U0 113 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 DNAJC21Q5F1R6 531 aaKnown RBP6.63□□□□□ -1.35
AP3B1-204ENST00000519295 PMM1Q92871 262 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 FOXO3O43524 673 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 ENPP1P22413 925 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 CC2D1BQ5T0F9 858 aaKnown RBP6.63□□□□□ -1.35
AP3B1-204ENST00000519295 SMC5Q8IY18 1101 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 ZNF609O15014 1411 aa6.63□□□□□ -1.35
AP3B1-204ENST00000519295 NEXNQ0ZGT2 675 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 IFT88Q13099 833 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 CDC37Q16543 378 aaPredicted RBP6.62□□□□□ -1.35
AP3B1-204ENST00000519295 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
AP3B1-204ENST00000519295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.62□□□□□ -1.358e-7■■■□□ 15.6
AP3B1-204ENST00000519295 DLG5Q8TDM6 1919 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 ARAP2Q8WZ64 1704 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 LETM1O95202 739 aaPredicted RBP6.62□□□□□ -1.35
AP3B1-204ENST00000519295 GIMAP6Q6P9H5 292 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 DONSONQ9NYP3 566 aa6.62□□□□□ -1.35
AP3B1-204ENST00000519295 KCNQ2O43526 872 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms