RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
CLK4-202ENST00000519132 NPR3P17342 541 aa9.85□□□□□ -0.83
CLK4-202ENST00000519132 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
CLK4-202ENST00000519132 COL19A1Q14993 1142 aa9.84□□□□□ -0.83
CLK4-202ENST00000519132 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
CLK4-202ENST00000519132 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
CLK4-202ENST00000519132 POLIQ9UNA4 740 aa9.84□□□□□ -0.83
CLK4-202ENST00000519132 RRBP1Q9P2E9 1410 aaKnown RBP9.83□□□□□ -0.84
CLK4-202ENST00000519132 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
CLK4-202ENST00000519132 ZEB1P37275 1124 aaPredicted RBP9.83□□□□□ -0.84
CLK4-202ENST00000519132 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
CLK4-202ENST00000519132 KANSL2Q9H9L4 492 aa9.83□□□□□ -0.84
CLK4-202ENST00000519132 NCOA2Q15596 1464 aa9.83□□□□□ -0.84
CLK4-202ENST00000519132 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
CLK4-202ENST00000519132 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
CLK4-202ENST00000519132 IRS1P35568 1242 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 DNM1Q05193 864 aaKnown RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 TMED8Q6PL24 325 aaPredicted RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 RAB6BQ9NRW1 208 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 CUEDC1Q9NWM3 386 aaPredicted RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 KIF14Q15058 1648 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 A0A0U1RQG5 324 aaPredicted RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 OPLAHO14841 1288 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 PARNO95453 639 aaKnown RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 FAM129BQ96TA1 746 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 ATAD2Q6PL18 1390 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 ITSN2Q9NZM3 1697 aa9.82□□□□□ -0.84
CLK4-202ENST00000519132 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
CLK4-202ENST00000519132 CLCN6P51797 869 aa9.81□□□□□ -0.84
CLK4-202ENST00000519132 USP48Q86UV5 1035 aa9.81□□□□□ -0.84
CLK4-202ENST00000519132 SRA1Q9HD15 236 aaKnown RBP9.81□□□□□ -0.84
CLK4-202ENST00000519132 USP4Q13107 963 aa9.81□□□□□ -0.84
CLK4-202ENST00000519132 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
CLK4-202ENST00000519132 SPSB2Q99619 263 aa9.81□□□□□ -0.84
CLK4-202ENST00000519132 CCDC85CA6NKD9 419 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 EPHA4P54764 986 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 NGLY1Q96IV0 654 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 PHLDB1Q86UU1 1377 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 ARID5AQ03989 594 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 CYLDQ9NQC7 956 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 FGRP09769 529 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 GMLQ99445 158 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 OSBPL2Q9H1P3 480 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 PPME1Q9Y570 386 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 MRVI1Q9Y6F6 885 aa9.8□□□□□ -0.84
CLK4-202ENST00000519132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLK4-202ENST00000519132 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 PTPROQ16827 1216 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
CLK4-202ENST00000519132 NBPF20Q3BBV1 942 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
CLK4-202ENST00000519132 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 CDC42BPAQ5VT25 1732 aa9.79□□□□□ -0.84
CLK4-202ENST00000519132 ENOX2Q16206 610 aaKnown RBP9.78□□□□□ -0.84
CLK4-202ENST00000519132 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.78□□□□□ -0.84
CLK4-202ENST00000519132 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
CLK4-202ENST00000519132 RBL2Q08999 1139 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
CLK4-202ENST00000519132 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 CLSPNQ9HAW4 1339 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 STIM2Q9P246 746 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 BCCIPQ9P287 314 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLK4-202ENST00000519132 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 NEUROD4Q9HD90 331 aa9.78□□□□□ -0.84
CLK4-202ENST00000519132 FGD6Q6ZV73 1430 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 SLC43A3Q8NBI5 491 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 KLRG1Q96E93 195 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 GGT7Q9UJ14 662 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 SUGT1Q9Y2Z0 365 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 CCNB3Q8WWL7 1395 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 IGFBP4P22692 258 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 CBLBQ13191 982 aa9.77□□□□□ -0.85
CLK4-202ENST00000519132 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.852e-6■■■□□ 16.6
CLK4-202ENST00000519132 METTL5Q9NRN9 209 aaKnown RBP9.77□□□□□ -0.85
CLK4-202ENST00000519132 hCG_2014768A0A024R1R8 64 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 PPP1R12BO60237 982 aaPredicted RBP9.76□□□□□ -0.85
CLK4-202ENST00000519132 GNA15P30679 374 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 GDF10P55107 478 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 V9GY48 417 aaPredicted RBP9.76□□□□□ -0.85
CLK4-202ENST00000519132 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 TCOF1Q13428 1488 aaKnown RBP9.76□□□□□ -0.85
CLK4-202ENST00000519132 WDR7Q9Y4E6 1490 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 PTPN23Q9H3S7 1636 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 KLK14Q9P0G3 267 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 MYO5CQ9NQX4 1742 aa9.76□□□□□ -0.85
CLK4-202ENST00000519132 PREX2Q70Z35 1606 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms