RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 DCTN1Q14203 1278 aa11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 MCM10Q7L590 875 aa11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 DZIP3Q86Y13 1208 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
CTNNA1-203ENST00000517534 SBF1O95248 1867 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 LTBP3Q9NS15 1303 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 NBPF10Q6P3W6 841 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 CNBD1Q8NA66 436 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
CTNNA1-203ENST00000517534 KLRG2A4D1S0 409 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-203ENST00000517534 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-203ENST00000517534 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-203ENST00000517534 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
CTNNA1-203ENST00000517534 ST5P78524 1137 aa11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 MASTLQ96GX5 879 aa11.15□□□□□ -0.62
CTNNA1-203ENST00000517534 SIPA1L3O60292 1781 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-203ENST00000517534 RGL2O15211 777 aa11.14□□□□□ -0.63
CTNNA1-203ENST00000517534 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
CTNNA1-203ENST00000517534 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
CTNNA1-203ENST00000517534 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 ANKRD31Q8N7Z5 1873 aa11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 HLFQ16534 295 aa11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 NIP7Q9Y221 180 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 SCN7AQ01118 1682 aa11.13□□□□□ -0.63
CTNNA1-203ENST00000517534 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 NPHP1O15259 732 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 NPR1P16066 1061 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 ZNF652Q9Y2D9 606 aa11.12□□□□□ -0.63
CTNNA1-203ENST00000517534 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-203ENST00000517534 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
CTNNA1-203ENST00000517534 COL11A2P13942 1736 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-203ENST00000517534 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
CTNNA1-203ENST00000517534 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
CTNNA1-203ENST00000517534 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 ERVV-1B6SEH8 477 aa11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-203ENST00000517534 FER1L6Q2WGJ9 1857 aa11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 NGEFQ8N5V2 710 aa11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 PNISRQ8TF01 805 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 TAF1DQ9H5J8 278 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-203ENST00000517534 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 BCORQ6W2J9 1755 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 SNED1Q8TER0 1413 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
CTNNA1-203ENST00000517534 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 FZD9O00144 591 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 ITGBL1O95965 494 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 GTF2E1P29083 439 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 HOXA10P31260 410 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 POTEHQ6S545 545 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
CTNNA1-203ENST00000517534 MYL6BP14649 208 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 GPTP24298 496 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 PDIA6Q15084 440 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 SUSD4Q5VX71 490 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 SLC51AQ86UW1 340 aa11.05□□□□□ -0.64
CTNNA1-203ENST00000517534 ZNF34Q8IZ26 560 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms