RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
SNX2-213ENST00000514949 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.98
SNX2-213ENST00000514949 GPATCH3Q96I76 525 aa21.14■□□□□ 0.98
SNX2-213ENST00000514949 AXIN2Q9Y2T1 843 aa21.14■□□□□ 0.98
SNX2-213ENST00000514949 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
SNX2-213ENST00000514949 RASEFQ8IZ41 740 aa21.14■□□□□ 0.97
SNX2-213ENST00000514949 RBM27Q9P2N5 1060 aaKnown RBP21.14■□□□□ 0.97
SNX2-213ENST00000514949 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.97
SNX2-213ENST00000514949 GRM8O00222 908 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 DDX58O95786 925 aaKnown RBP21.13■□□□□ 0.97
SNX2-213ENST00000514949 TMEM87AQ8NBN3 555 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 CHAMP1Q96JM3 812 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 TM6SF1Q9BZW5 370 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 NSFL1CQ9UNZ2 370 aaKnown RBP21.13■□□□□ 0.97
SNX2-213ENST00000514949 PDIA6Q15084 440 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 CWC27Q6UX04 472 aaKnown RBP21.13■□□□□ 0.97
SNX2-213ENST00000514949 KAZALD1Q96I82 304 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 LIMCH1Q9UPQ0 1083 aa21.13■□□□□ 0.97
SNX2-213ENST00000514949 ABCC6O95255 1503 aa21.12■□□□□ 0.97
SNX2-213ENST00000514949 EVI5LQ96CN4 794 aa21.12■□□□□ 0.97
SNX2-213ENST00000514949 SNRKQ9NRH2 765 aa21.12■□□□□ 0.97
SNX2-213ENST00000514949 ERBB3P21860 1342 aa21.12■□□□□ 0.97
SNX2-213ENST00000514949 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
SNX2-213ENST00000514949 RPAP1Q9BWH6 1393 aaPredicted RBP21.11■□□□□ 0.97
SNX2-213ENST00000514949 DIAPH3Q9NSV4 1193 aa21.11■□□□□ 0.97
SNX2-213ENST00000514949 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
SNX2-213ENST00000514949 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
SNX2-213ENST00000514949 KRT28Q7Z3Y7 464 aa21.11■□□□□ 0.97
SNX2-213ENST00000514949 ALS2Q96Q42 1657 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 IFIT2P09913 472 aaKnown RBP21.1■□□□□ 0.97
SNX2-213ENST00000514949 AK2P54819 239 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 PRAMEF22A3QJZ6 481 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 FOXD4L5Q5VV16 416 aaPredicted RBP21.1■□□□□ 0.97
SNX2-213ENST00000514949 RUFY3Q7L099 469 aa21.1■□□□□ 0.97
SNX2-213ENST00000514949 FOXD4L4Q8WXT5 416 aaPredicted RBP21.1■□□□□ 0.97
SNX2-213ENST00000514949 SYAP1Q96A49 352 aaPredicted RBP21.1■□□□□ 0.97
SNX2-213ENST00000514949 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.1■□□□□ 0.97
SNX2-213ENST00000514949 VPS53Q5VIR6 699 aa21.09■□□□□ 0.97
SNX2-213ENST00000514949 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
SNX2-213ENST00000514949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.09■□□□□ 0.971e-6■■■□□ 15.2
SNX2-213ENST00000514949 SPG7Q9UQ90 795 aa21.09■□□□□ 0.97
SNX2-213ENST00000514949 SYCE3A1L190 88 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 HIP1O00291 1037 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 SASH1O94885 1247 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 XPCQ01831 940 aaPredicted RBP21.08■□□□□ 0.97
SNX2-213ENST00000514949 KLHL34Q8N239 644 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 PA2G4Q9UQ80 394 aaKnown RBP21.08■□□□□ 0.97
SNX2-213ENST00000514949 RGPD5Q99666 1765 aa21.08■□□□□ 0.97
SNX2-213ENST00000514949 ZNF790Q6PG37 636 aa21.08■□□□□ 0.96
SNX2-213ENST00000514949 MRC1P22897 1456 aa21.08■□□□□ 0.96
SNX2-213ENST00000514949 NECTIN1Q15223 517 aa21.07■□□□□ 0.96
SNX2-213ENST00000514949 LARP1Q6PKG0 1096 aaKnown RBP21.07■□□□□ 0.96
SNX2-213ENST00000514949 PTH1RQ03431 593 aa21.07■□□□□ 0.96
SNX2-213ENST00000514949 AACSQ86V21 672 aa21.07■□□□□ 0.96
SNX2-213ENST00000514949 ZSCAN31Q96LW9 406 aaPredicted RBP21.07■□□□□ 0.96
SNX2-213ENST00000514949 BICC1Q9H694 974 aaKnown RBP21.07■□□□□ 0.96
SNX2-213ENST00000514949 SLC52A2Q9HAB3 445 aa21.07■□□□□ 0.96
SNX2-213ENST00000514949 NPHP3Q7Z494 1330 aa21.06■□□□□ 0.96
SNX2-213ENST00000514949 KDM6AO15550 1401 aaPredicted RBP21.06■□□□□ 0.96
SNX2-213ENST00000514949 IGKV5-2P06315 115 aa21.06■□□□□ 0.96
SNX2-213ENST00000514949 ZSCAN22P10073 491 aaPredicted RBP21.06■□□□□ 0.96
SNX2-213ENST00000514949 G3BP1Q13283 466 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX2-213ENST00000514949 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
SNX2-213ENST00000514949 SH2B1Q9NRF2 756 aaPredicted RBP21.05■□□□□ 0.96
SNX2-213ENST00000514949 CCDC171Q6TFL3 1326 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 PHF14O94880 888 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 CASTP20810 708 aaKnown RBP21.05■□□□□ 0.96
SNX2-213ENST00000514949 USP48Q86UV5 1035 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 TCHHQ07283 1943 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 C5P01031 1676 aa21.05■□□□□ 0.96
SNX2-213ENST00000514949 STX6O43752 255 aa21.04■□□□□ 0.96
SNX2-213ENST00000514949 SYT1P21579 422 aa21.04■□□□□ 0.96
SNX2-213ENST00000514949 MAP4K1Q92918 833 aa21.04■□□□□ 0.96
SNX2-213ENST00000514949 COL15A1P39059 1388 aa21.04■□□□□ 0.96
SNX2-213ENST00000514949 RAPGEF4Q8WZA2 1011 aa21.04■□□□□ 0.96
SNX2-213ENST00000514949 NOL7Q9UMY1 257 aaKnown RBP21.04■□□□□ 0.96
SNX2-213ENST00000514949 NEURL1BA8MQ27 555 aa21.03■□□□□ 0.96
SNX2-213ENST00000514949 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
SNX2-213ENST00000514949 ATP6V1DQ9Y5K8 247 aa21.03■□□□□ 0.96
SNX2-213ENST00000514949 CYP46A1Q9Y6A2 500 aa21.03■□□□□ 0.96
SNX2-213ENST00000514949 PDIA4P13667 645 aaKnown RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 PHKG2P15735 406 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 PDRG1Q9NUG6 133 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 SMC3Q9UQE7 1217 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 COL18A1P39060 1754 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 GADD45BO75293 160 aaPredicted RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 NEXNQ0ZGT2 675 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 GCKRQ14397 625 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 PRPF40BQ6NWY9 871 aaKnown RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 RIC3Q7Z5B4 369 aa21.02■□□□□ 0.96
SNX2-213ENST00000514949 PROSER2Q86WR7 435 aaPredicted RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 NAP1L5Q96NT1 182 aaPredicted RBP21.02■□□□□ 0.96
SNX2-213ENST00000514949 ZKSCAN1P17029 563 aaPredicted RBP21.01■□□□□ 0.95
SNX2-213ENST00000514949 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms