RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 A0A1W2PP64 1363 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 CLCN6P51797 869 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 BRPF1P55201 1214 aaPredicted RBP4.64□□□□□ -1.67
CHD1-211ENST00000514344 COL5A3P25940 1745 aaPredicted RBP4.64□□□□□ -1.67
CHD1-211ENST00000514344 CACNA1SQ13698 1873 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 NKX1-1Q15270 411 aaPredicted RBP4.64□□□□□ -1.67
CHD1-211ENST00000514344 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 ZNF277Q9NRM2 450 aaPredicted RBP4.64□□□□□ -1.67
CHD1-211ENST00000514344 SPG7Q9UQ90 795 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 TLL2Q9Y6L7 1015 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 ADAMTSL1Q8N6G6 1762 aa4.64□□□□□ -1.67
CHD1-211ENST00000514344 PRUNE2Q8WUY3 3088 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 LAMA2P24043 3122 aaKnown RBP4.63□□□□□ -1.67
CHD1-211ENST00000514344 PPM1GO15355 546 aaPredicted RBP4.63□□□□□ -1.67
CHD1-211ENST00000514344 TRPA1O75762 1119 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 CELF2O95319 508 aaKnown RBP4.63□□□□□ -1.67
CHD1-211ENST00000514344 PHKG2P15735 406 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 TERF2IPQ9NYB0 399 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 HPS5Q9UPZ3 1129 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 GJA3Q9Y6H8 435 aa4.63□□□□□ -1.67
CHD1-211ENST00000514344 NPHP1O15259 732 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 PRPF40BQ6NWY9 871 aaKnown RBP4.62□□□□□ -1.67
CHD1-211ENST00000514344 OLFM4Q6UX06 510 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 SYNE4Q8N205 404 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 GGNBP2Q9H3C7 697 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 SLX4Q8IY92 1834 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 LTBP3Q9NS15 1303 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 RAB3GAP2Q9H2M9 1393 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 TRPM7Q96QT4 1865 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 EPS15P42566 896 aa4.62□□□□□ -1.67
CHD1-211ENST00000514344 COLQQ9Y215 455 aaPredicted RBP4.62□□□□□ -1.67
CHD1-211ENST00000514344 SPTBN5Q9NRC6 3674 aaKnown RBP4.62□□□□□ -1.67
CHD1-211ENST00000514344 RTL1A6NKG5 1358 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 LMOD1P29536 600 aaPredicted RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 CABP4P57796 275 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 NOGQ13253 232 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 INTS5Q6P9B9 1019 aaKnown RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 KIAA0100Q14667 2235 aaKnown RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 COL11A2P13942 1736 aaPredicted RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 PDE6BP35913 854 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 CTU1Q7Z7A3 348 aaKnown RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 GPC2Q8N158 579 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 GLIS2Q9BZE0 524 aaPredicted RBP4.61□□□□□ -1.67
CHD1-211ENST00000514344 BCL2L12Q9HB09 334 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 INSRP06213 1382 aa4.61□□□□□ -1.67
CHD1-211ENST00000514344 ANKRD31Q8N7Z5 1873 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 AKAP4Q5JQC9 854 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 DCBLD2Q96PD2 775 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 ZNF330Q9Y3S2 320 aaPredicted RBP4.6□□□□□ -1.67
CHD1-211ENST00000514344 NRXN2Q9P2S2 1712 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 ROCK2O75116 1388 aaKnown RBP4.6□□□□□ -1.67
CHD1-211ENST00000514344 FLT4P35916 1363 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 SCNN1DP51172 638 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 HUNKP57058 714 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 DLK2Q6UY11 383 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 DNAJC10Q8IXB1 793 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 NFATC2IPQ8NCF5 419 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 CNKSR1Q969H4 720 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 BRIP1Q9BX63 1249 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 NARFQ9UHQ1 456 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 EMILIN1Q9Y6C2 1016 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 COL15A1P39059 1388 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 ADAMTS7Q9UKP4 1686 aa4.6□□□□□ -1.67
CHD1-211ENST00000514344 CCDC93Q567U6 631 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 TBC1D9BQ66K14 1250 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 PRR5LQ6MZQ0 368 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 JDP2Q8WYK2 163 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 RNF186Q9NXI6 227 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 HDAC9Q9UKV0 1011 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 ZBTB1Q9Y2K1 713 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 ERVV-2B6SEH9 535 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 FZD9O00144 591 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 SLC4A2P04920 1241 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 SRGNP10124 158 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 SOS1Q07889 1333 aaPredicted RBP4.59□□□□□ -1.67
CHD1-211ENST00000514344 ZNF831Q5JPB2 1677 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 SOGA3Q5TF21 947 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 EYA1Q99502 592 aa4.59□□□□□ -1.67
CHD1-211ENST00000514344 CDH23Q9H251 3354 aa4.59□□□□□ -1.68
CHD1-211ENST00000514344 CANXP27824 592 aaKnown RBP4.59□□□□□ -1.68
CHD1-211ENST00000514344 IARSP41252 1262 aaKnown RBP4.59□□□□□ -1.68
CHD1-211ENST00000514344 KIF23Q02241 960 aaPredicted RBP4.59□□□□□ -1.68
CHD1-211ENST00000514344 FKBP4Q02790 459 aaKnown RBP eCLIP4.59□□□□□ -1.68
CHD1-211ENST00000514344 SCN11AQ9UI33 1791 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 POTEFA5A3E0 1075 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 FYB1O15117 783 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
CHD1-211ENST00000514344 CNBD1Q8NA66 436 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 HHIPL1Q96JK4 782 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.58□□□□□ -1.681e-7■■■□□ 16.2
CHD1-211ENST00000514344 TJP1Q07157 1748 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 AKAP11Q9UKA4 1901 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 USP50Q70EL3 339 aaPredicted RBP4.58□□□□□ -1.68
CHD1-211ENST00000514344 MASTLQ96GX5 879 aa4.58□□□□□ -1.68
CHD1-211ENST00000514344 ST20-MTHFSA0A0A6YYL1 179 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 MTHFSP49914 203 aa4.57□□□□□ -1.68
CHD1-211ENST00000514344 ZNF157P51786 506 aaPredicted RBP4.57□□□□□ -1.68
CHD1-211ENST00000514344 ZNF296Q8WUU4 475 aaPredicted RBP4.57□□□□□ -1.68
CHD1-211ENST00000514344 C7orf43Q8WVR3 580 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms