RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ARXQ96QS3 562 aa19.96■□□□□ 0.79
NUP54-214ENST00000514307 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 NEURL1BA8MQ27 555 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 GRM8O00222 908 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 GCKRQ14397 625 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 HSP90AB3PQ58FF7 597 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 SIRT2Q8IXJ6 389 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
NUP54-214ENST00000514307 A0A087WZG4 1122 aa19.94■□□□□ 0.78
NUP54-214ENST00000514307 ERVV-1B6SEH8 477 aa19.94■□□□□ 0.78
NUP54-214ENST00000514307 ZNF330Q9Y3S2 320 aaPredicted RBP19.94■□□□□ 0.78
NUP54-214ENST00000514307 LRRFIP2Q9Y608 721 aaKnown RBP19.94■□□□□ 0.78
NUP54-214ENST00000514307 UTYO14607 1347 aa19.94■□□□□ 0.78
NUP54-214ENST00000514307 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
NUP54-214ENST00000514307 TOGARAM1Q9Y4F4 1720 aa19.93■□□□□ 0.78
NUP54-214ENST00000514307 IGKV5-2P06315 115 aa19.93■□□□□ 0.78
NUP54-214ENST00000514307 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
NUP54-214ENST00000514307 NUCB1Q02818 461 aa19.93■□□□□ 0.78
NUP54-214ENST00000514307 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
NUP54-214ENST00000514307 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
NUP54-214ENST00000514307 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
NUP54-214ENST00000514307 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
NUP54-214ENST00000514307 THSD7AQ9UPZ6 1657 aa19.92■□□□□ 0.78
NUP54-214ENST00000514307 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
NUP54-214ENST00000514307 RC3H1Q5TC82 1133 aaKnown RBP19.92■□□□□ 0.78
NUP54-214ENST00000514307 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
NUP54-214ENST00000514307 INTS5Q6P9B9 1019 aaKnown RBP19.92■□□□□ 0.78
NUP54-214ENST00000514307 CWC25Q9NXE8 425 aaPredicted RBP19.92■□□□□ 0.78
NUP54-214ENST00000514307 UBR2Q8IWV8 1755 aa19.92■□□□□ 0.78
NUP54-214ENST00000514307 EIF5P55010 431 aaKnown RBP19.91■□□□□ 0.78
NUP54-214ENST00000514307 FAM182BQ5T319 152 aa19.91■□□□□ 0.78
NUP54-214ENST00000514307 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
NUP54-214ENST00000514307 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
NUP54-214ENST00000514307 MAP3K15Q6ZN16 1313 aa19.91■□□□□ 0.78
NUP54-214ENST00000514307 ITPK1Q13572 414 aa19.9■□□□□ 0.78
NUP54-214ENST00000514307 HSP90AB4PQ58FF6 505 aa19.9■□□□□ 0.78
NUP54-214ENST00000514307 GIGYF2Q6Y7W6 1299 aaKnown RBP19.9■□□□□ 0.78
NUP54-214ENST00000514307 ITGB4P16144 1822 aa19.9■□□□□ 0.78
NUP54-214ENST00000514307 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
NUP54-214ENST00000514307 DZIP3Q86Y13 1208 aaKnown RBP19.89■□□□□ 0.77
NUP54-214ENST00000514307 SSH3Q8TE77 659 aa19.89■□□□□ 0.77
NUP54-214ENST00000514307 ZBTB1Q9Y2K1 713 aa19.89■□□□□ 0.77
NUP54-214ENST00000514307 H7C1W4 665 aa19.88■□□□□ 0.77
NUP54-214ENST00000514307 RGS3P49796 1198 aa19.88■□□□□ 0.77
NUP54-214ENST00000514307 ISCA1Q9BUE6 129 aa19.88■□□□□ 0.77
NUP54-214ENST00000514307 CCNL1Q9UK58 526 aaPredicted RBP19.88■□□□□ 0.77
NUP54-214ENST00000514307 C5P01031 1676 aa19.87■□□□□ 0.77
NUP54-214ENST00000514307 RAB11FIP3O75154 756 aa19.87■□□□□ 0.77
NUP54-214ENST00000514307 MTX1Q13505 466 aa19.87■□□□□ 0.77
NUP54-214ENST00000514307 PPP1R42Q7Z4L9 355 aa19.87■□□□□ 0.77
NUP54-214ENST00000514307 DOT1LQ8TEK3 1739 aa19.86■□□□□ 0.77
NUP54-214ENST00000514307 RGL2O15211 777 aa19.86■□□□□ 0.77
NUP54-214ENST00000514307 SRGAP3O43295 1099 aa19.86■□□□□ 0.77
NUP54-214ENST00000514307 CNTNAP4Q9C0A0 1308 aa19.85■□□□□ 0.77
NUP54-214ENST00000514307 POLA2Q14181 598 aa19.85■□□□□ 0.77
NUP54-214ENST00000514307 SLC27A3Q5K4L6 730 aa19.85■□□□□ 0.77
NUP54-214ENST00000514307 TBC1D2BQ9UPU7 963 aa19.85■□□□□ 0.77
NUP54-214ENST00000514307 LAMB4A4D0S4 1761 aa19.85■□□□□ 0.77
NUP54-214ENST00000514307 KAT6BQ8WYB5 2073 aa19.84■□□□□ 0.77
NUP54-214ENST00000514307 RPS6KA4O75676 772 aa19.84■□□□□ 0.77
NUP54-214ENST00000514307 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
NUP54-214ENST00000514307 ZNF652Q9Y2D9 606 aa19.84■□□□□ 0.77
NUP54-214ENST00000514307 PNMA6EA0A0J9YXQ4 647 aa19.83■□□□□ 0.77
NUP54-214ENST00000514307 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.77
NUP54-214ENST00000514307 HSP90B1P14625 803 aaKnown RBP19.83■□□□□ 0.77
NUP54-214ENST00000514307 CLEC4GQ6UXB4 293 aa19.83■□□□□ 0.77
NUP54-214ENST00000514307 UBE3BQ7Z3V4 1068 aa19.83■□□□□ 0.77
NUP54-214ENST00000514307 LINC00116Q8NCU8 138 aa19.83■□□□□ 0.77
NUP54-214ENST00000514307 SUCLG2Q96I99 432 aa19.83■□□□□ 0.77
NUP54-214ENST00000514307 COL15A1P39059 1388 aa19.83■□□□□ 0.76
NUP54-214ENST00000514307 TRIM37O94972 964 aa19.82■□□□□ 0.76
NUP54-214ENST00000514307 LRRCC1Q9C099 1032 aa19.82■□□□□ 0.76
NUP54-214ENST00000514307 LNPKQ9C0E8 428 aa19.82■□□□□ 0.76
NUP54-214ENST00000514307 PCCAP05165 728 aaPredicted RBP19.81■□□□□ 0.76
NUP54-214ENST00000514307 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
NUP54-214ENST00000514307 ERC1Q8IUD2 1116 aa19.81■□□□□ 0.76
NUP54-214ENST00000514307 ZBTB38Q8NAP3 1195 aaPredicted RBP19.81■□□□□ 0.76
NUP54-214ENST00000514307 BICC1Q9H694 974 aaKnown RBP19.81■□□□□ 0.76
NUP54-214ENST00000514307 NOP58Q9Y2X3 529 aaKnown RBP19.81■□□□□ 0.76
NUP54-214ENST00000514307 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
NUP54-214ENST00000514307 EP400Q96L91 3159 aa19.81■□□□□ 0.76
NUP54-214ENST00000514307 HLFQ16534 295 aa19.8■□□□□ 0.76
NUP54-214ENST00000514307 ZNF34Q8IZ26 560 aa19.8■□□□□ 0.76
NUP54-214ENST00000514307 CASP7P55210 303 aa19.79■□□□□ 0.76
NUP54-214ENST00000514307 G3BP1Q13283 466 aaKnown RBP eCLIP19.79■□□□□ 0.76
NUP54-214ENST00000514307 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
NUP54-214ENST00000514307 UPF1Q92900 1129 aaKnown RBP eCLIP19.79■□□□□ 0.76
NUP54-214ENST00000514307 PLSCR1O15162 318 aa19.78■□□□□ 0.76
NUP54-214ENST00000514307 OS9Q13438 667 aaPredicted RBP19.78■□□□□ 0.76
NUP54-214ENST00000514307 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
NUP54-214ENST00000514307 KIF1BPQ96EK5 621 aa19.78■□□□□ 0.76
NUP54-214ENST00000514307 KAZALD1Q96I82 304 aa19.78■□□□□ 0.76
NUP54-214ENST00000514307 AK7Q96M32 723 aa19.78■□□□□ 0.76
NUP54-214ENST00000514307 ZPR1O75312 459 aa19.77■□□□□ 0.76
NUP54-214ENST00000514307 CAMTA2O94983 1202 aa19.77■□□□□ 0.76
NUP54-214ENST00000514307 PDE4AP27815 886 aa19.77■□□□□ 0.76
NUP54-214ENST00000514307 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
NUP54-214ENST00000514307 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.76
NUP54-214ENST00000514307 SKAP1Q86WV1 359 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 266.2 ms