RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-218	ENST00000513632	HTRA3	P83110	453 aa		12.06	□□□□□ -0.48
PABPC4-218	ENST00000513632	TAF7	Q15545	349 aa	Predicted RBP	12.06	□□□□□ -0.48
PABPC4-218	ENST00000513632	COL3A1	P02461	1466 aa	Predicted RBP	12.06	□□□□□ -0.48
PABPC4-218	ENST00000513632	GTF2E1	P29083	439 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	PRELP	P51888	382 aa		12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	PRPF40B	Q6NWY9	871 aa	Known RBP	12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	JMY	Q8N9B5	988 aa		12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	PNISR	Q8TF01	805 aa	Known RBP	12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	PNN	Q9H307	717 aa	Known RBP	12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	LTBP3	Q9NS15	1303 aa		12.05	□□□□□ -0.48
PABPC4-218	ENST00000513632	TULP1	O00294	542 aa	Predicted RBP	12.04	□□□□□ -0.48
PABPC4-218	ENST00000513632	RGL2	O15211	777 aa		12.04	□□□□□ -0.48
PABPC4-218	ENST00000513632	NPR1	P16066	1061 aa		12.04	□□□□□ -0.48
PABPC4-218	ENST00000513632	PIP4K2A	P48426	406 aa	Predicted RBP	12.04	□□□□□ -0.48
PABPC4-218	ENST00000513632	ADAMTS7	Q9UKP4	1686 aa		12.03	□□□□□ -0.48
PABPC4-218	ENST00000513632	ARFGEF1	Q9Y6D6	1849 aa		12.03	□□□□□ -0.48
PABPC4-218	ENST00000513632	PRAMEF22	A3QJZ6	481 aa		12.03	□□□□□ -0.48
PABPC4-218	ENST00000513632	DCTN1	Q14203	1278 aa		12.03	□□□□□ -0.48
PABPC4-218	ENST00000513632	CCDC93	Q567U6	631 aa		12.03	□□□□□ -0.48
PABPC4-218	ENST00000513632	IQCA1L	A6NCM1	817 aa		12.02	□□□□□ -0.49
PABPC4-218	ENST00000513632	FAM177B	A6PVY3	158 aa		12.02	□□□□□ -0.49
PABPC4-218	ENST00000513632	ALDH1B1	P30837	517 aa		12.02	□□□□□ -0.49
PABPC4-218	ENST00000513632	HOMEZ	Q8IX15	550 aa		12.02	□□□□□ -0.49
PABPC4-218	ENST00000513632	RTKN2	Q8IZC4	609 aa		12.02	□□□□□ -0.49
PABPC4-218	ENST00000513632	DDN	O94850	711 aa	Predicted RBP	12.01	□□□□□ -0.49
PABPC4-218	ENST00000513632	NYX	Q9GZU5	481 aa		12.01	□□□□□ -0.49
PABPC4-218	ENST00000513632	BRCA1	P38398	1863 aa	Known RBP	12.01	□□□□□ -0.49
PABPC4-218	ENST00000513632	NRXN2	Q9P2S2	1712 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	KLRG2	A4D1S0	409 aa	Predicted RBP	12	□□□□□ -0.49
PABPC4-218	ENST00000513632	POTEC	B2RU33	542 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	NBPF26	B4DH59	902 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	FKBP4	Q02790	459 aa	Known RBP eCLIP	12	□□□□□ -0.49
PABPC4-218	ENST00000513632	CHADL	Q6NUI6	762 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	NBPF10	Q6P3W6	841 aa	Known RBP	12	□□□□□ -0.49
PABPC4-218	ENST00000513632	KIF6	Q6ZMV9	814 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	NGEF	Q8N5V2	710 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	NBPF15	Q8N660	670 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	MIS18A	Q9NYP9	233 aa		12	□□□□□ -0.49
PABPC4-218	ENST00000513632	ERVV-1	B6SEH8	477 aa		11.99	□□□□□ -0.49
PABPC4-218	ENST00000513632	C7orf43	Q8WVR3	580 aa		11.99	□□□□□ -0.49
PABPC4-218	ENST00000513632	RRP7A	Q9Y3A4	280 aa	Known RBP	11.99	□□□□□ -0.49
PABPC4-218	ENST00000513632	MAPK8IP3	Q9UPT6	1336 aa		11.99	□□□□□ -0.49
PABPC4-218	ENST00000513632	UBR2	Q8IWV8	1755 aa		11.98	□□□□□ -0.49
PABPC4-218	ENST00000513632	HLF	Q16534	295 aa		11.98	□□□□□ -0.49
PABPC4-218	ENST00000513632	CREBZF	Q9NS37	354 aa		11.98	□□□□□ -0.49
PABPC4-218	ENST00000513632	EIF4A1	P60842	406 aa	Known RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	NFE2L2	Q16236	605 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	TPRN	Q4KMQ1	711 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	CC2D2B	Q6DHV5	1058 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	LDHD	Q86WU2	507 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	TNS4	Q8IZW8	715 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	JDP2	Q8WYK2	163 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	RPGR	Q92834	1020 aa	Known RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	TMX4	Q9H1E5	349 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	CLEC11A	Q9Y240	323 aa		11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.97	□□□□□ -0.49
PABPC4-218	ENST00000513632	MAP3K15	Q6ZN16	1313 aa		11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	AFDN	P55196	1824 aa	Known RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	HSPA1A	P0DMV8	641 aa	Known RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	HSPA1B	P0DMV9	641 aa	Known RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	MYL6B	P14649	208 aa		11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	IARS	P41252	1262 aa	Known RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	GRIPAP1	Q4V328	841 aa		11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	PNMA8A	Q86V59	439 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	SYNE4	Q8N205	404 aa		11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	HACL1	Q9UJ83	578 aa		11.96	□□□□□ -0.49
PABPC4-218	ENST00000513632	EIF6	P56537	245 aa	Known RBP	11.95	□□□□□ -0.5
PABPC4-218	ENST00000513632	EAPP	Q56P03	285 aa	Predicted RBP	11.95	□□□□□ -0.5
PABPC4-218	ENST00000513632	PPP1R42	Q7Z4L9	355 aa		11.95	□□□□□ -0.5
PABPC4-218	ENST00000513632	RBM17	Q96I25	401 aa	Known RBP	11.95	□□□□□ -0.5
PABPC4-218	ENST00000513632	PLEKHF1	Q96S99	279 aa		11.95	□□□□□ -0.5
PABPC4-218	ENST00000513632	WDR90	Q96KV7	1748 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	GPT	P24298	496 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	NUTM1	Q86Y26	1132 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	PSMD1	Q99460	953 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	ZBTB3	Q9H5J0	574 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	MKRN1	Q9UHC7	482 aa	Known RBP	11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	TSPYL4	Q9UJ04	414 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	SCN7A	Q01118	1682 aa		11.94	□□□□□ -0.5
PABPC4-218	ENST00000513632	ERBB4	Q15303	1308 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	FZD9	O00144	591 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	POTEI	P0CG38	1075 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	POTEJ	P0CG39	1038 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	EPHX2	P34913	555 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	PLCB2	Q00722	1185 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	LMOD3	Q0VAK6	560 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	CRY2	Q49AN0	593 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	PARP10	Q53GL7	1025 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	TTLL7	Q6ZT98	887 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	GPC2	Q8N158	579 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	SBF1	O95248	1867 aa		11.93	□□□□□ -0.5
PABPC4-218	ENST00000513632	TMEM88B	A6NKF7	163 aa		11.92	□□□□□ -0.5
PABPC4-218	ENST00000513632	EIF2S2	P20042	333 aa	Known RBP	11.92	□□□□□ -0.5
PABPC4-218	ENST00000513632	LMOD1	P29536	600 aa	Predicted RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms