RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 JCADQ9P266 1359 aa12.88□□□□□ -0.35
SNF8-211ENST00000512243 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
SNF8-211ENST00000512243 JUNDP17535 347 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 PRR20EP86478 221 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 PRR20CP86479 221 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 PRR20DP86480 221 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 PRR20BP86481 221 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 PRR20AP86496 221 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 DDX10Q13206 875 aaKnown RBP12.87□□□□□ -0.35
SNF8-211ENST00000512243 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
SNF8-211ENST00000512243 CD2BP2O95400 341 aaKnown RBP12.86□□□□□ -0.35
SNF8-211ENST00000512243 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
SNF8-211ENST00000512243 PKD2L1Q9P0L9 805 aa12.86□□□□□ -0.35
SNF8-211ENST00000512243 NSD2O96028 1365 aa12.85□□□□□ -0.35
SNF8-211ENST00000512243 NME9Q86XW9 330 aa12.85□□□□□ -0.35
SNF8-211ENST00000512243 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
SNF8-211ENST00000512243 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
SNF8-211ENST00000512243 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SNF8-211ENST00000512243 SLIT3O75094 1523 aa12.84□□□□□ -0.35
SNF8-211ENST00000512243 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
SNF8-211ENST00000512243 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
SNF8-211ENST00000512243 LTN1O94822 1766 aa12.84□□□□□ -0.35
SNF8-211ENST00000512243 TRIM32Q13049 653 aa12.83□□□□□ -0.36
SNF8-211ENST00000512243 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
SNF8-211ENST00000512243 COG3Q96JB2 828 aa12.83□□□□□ -0.36
SNF8-211ENST00000512243 USP19O94966 1318 aa12.83□□□□□ -0.36
SNF8-211ENST00000512243 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
SNF8-211ENST00000512243 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SNF8-211ENST00000512243 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
SNF8-211ENST00000512243 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
SNF8-211ENST00000512243 NFAT5O94916 1531 aa12.82□□□□□ -0.36
SNF8-211ENST00000512243 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 FAM187AA6NFU0 413 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 FYB1O15117 783 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
SNF8-211ENST00000512243 MTMR2Q13614 643 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
SNF8-211ENST00000512243 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
SNF8-211ENST00000512243 PKDCCQ504Y2 493 aa12.8□□□□□ -0.36
SNF8-211ENST00000512243 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
SNF8-211ENST00000512243 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
SNF8-211ENST00000512243 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
SNF8-211ENST00000512243 LRP6O75581 1613 aa12.78□□□□□ -0.36
SNF8-211ENST00000512243 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
SNF8-211ENST00000512243 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
SNF8-211ENST00000512243 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
SNF8-211ENST00000512243 SPTLC1O15269 473 aa12.78□□□□□ -0.36
SNF8-211ENST00000512243 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
SNF8-211ENST00000512243 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
SNF8-211ENST00000512243 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
SNF8-211ENST00000512243 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
SNF8-211ENST00000512243 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
SNF8-211ENST00000512243 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
SNF8-211ENST00000512243 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
SNF8-211ENST00000512243 ABCC6O95255 1503 aa12.77□□□□□ -0.37
SNF8-211ENST00000512243 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
SNF8-211ENST00000512243 GCP02774 474 aa12.76□□□□□ -0.37
SNF8-211ENST00000512243 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
SNF8-211ENST00000512243 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
SNF8-211ENST00000512243 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
SNF8-211ENST00000512243 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
SNF8-211ENST00000512243 CPDO75976 1380 aa12.75□□□□□ -0.37
SNF8-211ENST00000512243 GJA5P36382 358 aa12.75□□□□□ -0.37
SNF8-211ENST00000512243 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
SNF8-211ENST00000512243 COL18A1P39060 1754 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 KIAA0232Q92628 1395 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 ZBTB7CA1YPR0 619 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 SPDYE5A6NIY4 337 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 DGAT1O75907 488 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 CCNYL3P0C7X3 344 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
SNF8-211ENST00000512243 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
SNF8-211ENST00000512243 CYP4X1Q8N118 509 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
SNF8-211ENST00000512243 RTL1A6NKG5 1358 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 SKOR1P84550 965 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 PRDM11Q9NQV5 511 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
SNF8-211ENST00000512243 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
SNF8-211ENST00000512243 WNT7AO00755 349 aa12.72□□□□□ -0.37
SNF8-211ENST00000512243 MYT1Q01538 1121 aa12.72□□□□□ -0.37
SNF8-211ENST00000512243 PTPRNQ16849 979 aa12.72□□□□□ -0.37
SNF8-211ENST00000512243 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
SNF8-211ENST00000512243 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
SNF8-211ENST00000512243 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
SNF8-211ENST00000512243 RALBP1Q15311 655 aa12.71□□□□□ -0.37
SNF8-211ENST00000512243 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
SNF8-211ENST00000512243 MRGPRX2Q96LB1 330 aa12.71□□□□□ -0.37
SNF8-211ENST00000512243 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
SNF8-211ENST00000512243 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms