RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 IL2RBP14784 551 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 COL9A1P20849 921 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 PSEN2P49810 448 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 EVA1CP58658 441 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
NR1I3-230ENST00000511944 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
NR1I3-230ENST00000511944 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
NR1I3-230ENST00000511944 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
NR1I3-230ENST00000511944 VAMP4O75379 141 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 PHKG2P15735 406 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 TEFQ10587 303 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-230ENST00000511944 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 BTG4Q9NY30 223 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
NR1I3-230ENST00000511944 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
NR1I3-230ENST00000511944 LRP6O75581 1613 aa11.65□□□□□ -0.54
NR1I3-230ENST00000511944 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-230ENST00000511944 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
NR1I3-230ENST00000511944 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.55
NR1I3-230ENST00000511944 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
NR1I3-230ENST00000511944 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-230ENST00000511944 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
NR1I3-230ENST00000511944 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
NR1I3-230ENST00000511944 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
NR1I3-230ENST00000511944 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
NR1I3-230ENST00000511944 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-230ENST00000511944 BCAR3O75815 825 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
NR1I3-230ENST00000511944 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
NR1I3-230ENST00000511944 CYP27B1O15528 508 aa11.62□□□□□ -0.55
NR1I3-230ENST00000511944 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
NR1I3-230ENST00000511944 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-230ENST00000511944 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
NR1I3-230ENST00000511944 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
NR1I3-230ENST00000511944 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
NR1I3-230ENST00000511944 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 PTPREP23469 700 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
NR1I3-230ENST00000511944 PTGDRQ13258 359 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
NR1I3-230ENST00000511944 PTPRCP08575 1304 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 VPS72Q15906 364 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
NR1I3-230ENST00000511944 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
NR1I3-230ENST00000511944 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
NR1I3-230ENST00000511944 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
NR1I3-230ENST00000511944 BCL9LQ86UU0 1499 aa11.59□□□□□ -0.55
NR1I3-230ENST00000511944 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
NR1I3-230ENST00000511944 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
NR1I3-230ENST00000511944 TSPYL6Q8N831 410 aa11.59□□□□□ -0.55
NR1I3-230ENST00000511944 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
NR1I3-230ENST00000511944 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 PLIN1O60240 522 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 FECHP22830 423 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 PBX2P40425 430 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NR1I3-230ENST00000511944 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 TRIM27P14373 513 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
NR1I3-230ENST00000511944 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-230ENST00000511944 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 ABCC4O15439 1325 aa11.57□□□□□ -0.56
NR1I3-230ENST00000511944 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 EXOC5O00471 708 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 HSPA1LP34931 641 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 PROX2Q3B8N5 592 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-230ENST00000511944 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
NR1I3-230ENST00000511944 ZBED2Q9BTP6 218 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms