RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 DOC2BQ14184 412 aa7.87□□□□□ -1.15
UBE2D3-230ENST00000510599 PRRT3Q5FWE3 981 aa7.87□□□□□ -1.15
UBE2D3-230ENST00000510599 LRRC69Q6ZNQ3 347 aa7.87□□□□□ -1.15
UBE2D3-230ENST00000510599 SLC9A9Q8IVB4 645 aa7.87□□□□□ -1.15
UBE2D3-230ENST00000510599 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
UBE2D3-230ENST00000510599 SEMA6BQ9H3T3 888 aa7.86□□□□□ -1.15
UBE2D3-230ENST00000510599 ALG2Q9H553 416 aa7.86□□□□□ -1.15
UBE2D3-230ENST00000510599 USP17L5A8MUK1 530 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 EPHA4P54764 986 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 TRIM50Q86XT4 487 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
UBE2D3-230ENST00000510599 SERTM1A2A2V5 107 aa7.84□□□□□ -1.15
UBE2D3-230ENST00000510599 APBA3O96018 575 aa7.84□□□□□ -1.15
UBE2D3-230ENST00000510599 TNFRSF25Q93038 417 aa7.84□□□□□ -1.15
UBE2D3-230ENST00000510599 MDFIQ99750 246 aa7.84□□□□□ -1.15
UBE2D3-230ENST00000510599 CHMP3Q9Y3E7 222 aa7.84□□□□□ -1.15
UBE2D3-230ENST00000510599 TBCELQ5QJ74 424 aa7.83□□□□□ -1.16
UBE2D3-230ENST00000510599 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
UBE2D3-230ENST00000510599 M0R082 166 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 ATP1A2P50993 1020 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 PSMA6P60900 246 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 SFSWAPQ12872 951 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 ZNF417Q8TAU3 575 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 ZNF587Q96SQ5 575 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 PRDM6Q9NQX0 595 aa7.82□□□□□ -1.16
UBE2D3-230ENST00000510599 ITGB7P26010 798 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 ZMYM1Q5SVZ6 1142 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 TPCN2Q8NHX9 752 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
UBE2D3-230ENST00000510599 ADH7P40394 386 aa7.8□□□□□ -1.16
UBE2D3-230ENST00000510599 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
UBE2D3-230ENST00000510599 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
UBE2D3-230ENST00000510599 RAD21O60216 631 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 ALBP02768 609 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 HIRAP54198 1017 aaPredicted RBP7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 RSPO4Q2I0M5 234 aaPredicted RBP7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 C7orf43Q8WVR3 580 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 CEP63Q96MT8 703 aa7.79□□□□□ -1.16
UBE2D3-230ENST00000510599 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 USP17L2Q6R6M4 530 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 PHACTR1Q9C0D0 580 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 TSPAN10Q9H1Z9 355 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
UBE2D3-230ENST00000510599 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 M0R2N6 131 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 KCNQ4P56696 695 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 TYRO3Q06418 890 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 COL9A3Q14050 684 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 NKAPLQ5M9Q1 402 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 TPSG1Q9NRR2 321 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 KIAA1024Q9UPX6 916 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
UBE2D3-230ENST00000510599 NID1P14543 1247 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 CLDN10P78369 228 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 LARGE2Q8N3Y3 721 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 POM121Q96HA1 1249 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 HCN4Q9Y3Q4 1203 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 MYO15BQ96JP2 1530 aa7.76□□□□□ -1.17
UBE2D3-230ENST00000510599 SCO2A0A1W2PP80 73 aa7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 ZBTB7BO15156 539 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 LILRB5O75023 590 aa7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 HIF1AQ16665 826 aa7.75□□□□□ -1.17
UBE2D3-230ENST00000510599 DYRK3O43781 588 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 ATP9BO43861 1147 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 C20orf204Q6ZNR8 217 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 SIX5Q8N196 739 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 OGFOD1Q8N543 542 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 BHMTQ93088 406 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 SUSD3Q96L08 255 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 UBE2OQ9C0C9 1292 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-230ENST00000510599 C9orf172C9J069 976 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 PPP1R12BO60237 982 aaPredicted RBP7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 TBC1D8BQ0IIM8 1120 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 GRIK4Q16099 956 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 TRAPPC3LQ5T215 181 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 ZNF280CQ8ND82 737 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
UBE2D3-230ENST00000510599 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
UBE2D3-230ENST00000510599 UBTFP17480 764 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms