RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 COL11A2P13942 1736 aaPredicted RBP17.72■□□□□ 0.43
SNF8-206ENST00000509989 CHRNA5P30532 468 aa17.71■□□□□ 0.43
SNF8-206ENST00000509989 GPR162Q16538 588 aa17.71■□□□□ 0.43
SNF8-206ENST00000509989 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SNF8-206ENST00000509989 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
SNF8-206ENST00000509989 CACNA1SQ13698 1873 aa17.7■□□□□ 0.42
SNF8-206ENST00000509989 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
SNF8-206ENST00000509989 DLEC1Q9Y238 1755 aa17.7■□□□□ 0.42
SNF8-206ENST00000509989 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
SNF8-206ENST00000509989 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
SNF8-206ENST00000509989 GNAI1P63096 354 aa17.68■□□□□ 0.42
SNF8-206ENST00000509989 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
SNF8-206ENST00000509989 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
SNF8-206ENST00000509989 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
SNF8-206ENST00000509989 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
SNF8-206ENST00000509989 PRR5LQ6MZQ0 368 aa17.67■□□□□ 0.42
SNF8-206ENST00000509989 MIER1Q8N108 512 aa17.67■□□□□ 0.42
SNF8-206ENST00000509989 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
SNF8-206ENST00000509989 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
SNF8-206ENST00000509989 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
SNF8-206ENST00000509989 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
SNF8-206ENST00000509989 MAP3K15Q6ZN16 1313 aa17.66■□□□□ 0.42
SNF8-206ENST00000509989 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
SNF8-206ENST00000509989 TGFB2P61812 414 aa17.65■□□□□ 0.42
SNF8-206ENST00000509989 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
SNF8-206ENST00000509989 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
SNF8-206ENST00000509989 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
SNF8-206ENST00000509989 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
SNF8-206ENST00000509989 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
SNF8-206ENST00000509989 ARFGEF2Q9Y6D5 1785 aa17.64■□□□□ 0.41
SNF8-206ENST00000509989 GPTP24298 496 aa17.64■□□□□ 0.41
SNF8-206ENST00000509989 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
SNF8-206ENST00000509989 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNF8-206ENST00000509989 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
SNF8-206ENST00000509989 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
SNF8-206ENST00000509989 DDX21Q9NR30 783 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNF8-206ENST00000509989 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
SNF8-206ENST00000509989 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
SNF8-206ENST00000509989 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
SNF8-206ENST00000509989 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
SNF8-206ENST00000509989 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
SNF8-206ENST00000509989 SLX4Q8IY92 1834 aa17.62■□□□□ 0.41
SNF8-206ENST00000509989 FANCIQ9NVI1 1328 aa17.62■□□□□ 0.41
SNF8-206ENST00000509989 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 LAMB2P55268 1798 aa17.61■□□□□ 0.41
SNF8-206ENST00000509989 HOXB7P09629 217 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 ZNF34Q8IZ26 560 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 IL16Q14005 1332 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 ATP10DQ9P241 1426 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
SNF8-206ENST00000509989 SBF1O95248 1867 aa17.59■□□□□ 0.41
SNF8-206ENST00000509989 YY1P25490 414 aa17.59■□□□□ 0.41
SNF8-206ENST00000509989 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
SNF8-206ENST00000509989 GIGYF2Q6Y7W6 1299 aaKnown RBP17.59■□□□□ 0.41
SNF8-206ENST00000509989 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
SNF8-206ENST00000509989 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
SNF8-206ENST00000509989 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
SNF8-206ENST00000509989 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
SNF8-206ENST00000509989 TAF1P21675 1872 aa17.58■□□□□ 0.41
SNF8-206ENST00000509989 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SNF8-206ENST00000509989 ERFEQ4G0M1 354 aa17.58■□□□□ 0.4
SNF8-206ENST00000509989 G2E3Q7L622 706 aa17.58■□□□□ 0.4
SNF8-206ENST00000509989 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
SNF8-206ENST00000509989 DBF4Q9UBU7 674 aaPredicted RBP17.58■□□□□ 0.4
SNF8-206ENST00000509989 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
SNF8-206ENST00000509989 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
SNF8-206ENST00000509989 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
SNF8-206ENST00000509989 PIM2Q9P1W9 311 aa17.57■□□□□ 0.4
SNF8-206ENST00000509989 NTSR2O95665 410 aa17.56■□□□□ 0.4
SNF8-206ENST00000509989 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
SNF8-206ENST00000509989 RGL2O15211 777 aa17.55■□□□□ 0.4
SNF8-206ENST00000509989 GRIN3BO60391 1043 aa17.55■□□□□ 0.4
SNF8-206ENST00000509989 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SNF8-206ENST00000509989 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
SNF8-206ENST00000509989 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 H0YIN7 160 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 NPHP1O15259 732 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 VAMP4O75379 141 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 PRELPP51888 382 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
SNF8-206ENST00000509989 ANKRD13DQ6ZTN6 518 aa17.54■□□□□ 0.4
SNF8-206ENST00000509989 ZNF622Q969S3 477 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNF8-206ENST00000509989 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 FER1L6Q2WGJ9 1857 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 COL4A1P02462 1669 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 SRGNP10124 158 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 ST5P78524 1137 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 TCIRG1Q13488 830 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 NLRP10Q86W26 655 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 PLBD2Q8NHP8 589 aa17.53■□□□□ 0.4
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