RNA–Protein interactions for RNA: ENST00000508283.5

TRIO-210, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-210ENST00000508283 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
TRIO-210ENST00000508283 NBPF10Q6P3W6 841 aaKnown RBP11.14□□□□□ -0.63
TRIO-210ENST00000508283 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
TRIO-210ENST00000508283 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
TRIO-210ENST00000508283 CNBD1Q8NA66 436 aa11.14□□□□□ -0.63
TRIO-210ENST00000508283 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
TRIO-210ENST00000508283 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
TRIO-210ENST00000508283 RGL2O15211 777 aa11.13□□□□□ -0.63
TRIO-210ENST00000508283 SNRPA1P09661 255 aaKnown RBP11.13□□□□□ -0.63
TRIO-210ENST00000508283 MCM10Q7L590 875 aa11.13□□□□□ -0.63
TRIO-210ENST00000508283 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
TRIO-210ENST00000508283 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
TRIO-210ENST00000508283 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
TRIO-210ENST00000508283 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
TRIO-210ENST00000508283 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
TRIO-210ENST00000508283 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
TRIO-210ENST00000508283 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
TRIO-210ENST00000508283 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
TRIO-210ENST00000508283 CFAP53Q96M91 514 aa11.12□□□□□ -0.63
TRIO-210ENST00000508283 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
TRIO-210ENST00000508283 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
TRIO-210ENST00000508283 FER1L6Q2WGJ9 1857 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
TRIO-210ENST00000508283 ST5P78524 1137 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIO-210ENST00000508283 DCTN1Q14203 1278 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 NBPF5PQ86XG9 351 aaPredicted RBP11.11□□□□□ -0.63
TRIO-210ENST00000508283 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
TRIO-210ENST00000508283 NPR1P16066 1061 aa11.1□□□□□ -0.63
TRIO-210ENST00000508283 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
TRIO-210ENST00000508283 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
TRIO-210ENST00000508283 RTF1Q92541 710 aaKnown RBP11.1□□□□□ -0.63
TRIO-210ENST00000508283 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
TRIO-210ENST00000508283 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
TRIO-210ENST00000508283 HLFQ16534 295 aa11.09□□□□□ -0.63
TRIO-210ENST00000508283 OLFM4Q6UX06 510 aa11.09□□□□□ -0.63
TRIO-210ENST00000508283 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
TRIO-210ENST00000508283 MIS18AQ9NYP9 233 aa11.09□□□□□ -0.63
TRIO-210ENST00000508283 NIP7Q9Y221 180 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIO-210ENST00000508283 ZNF652Q9Y2D9 606 aa11.09□□□□□ -0.63
TRIO-210ENST00000508283 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
TRIO-210ENST00000508283 NPHP1O15259 732 aa11.08□□□□□ -0.64
TRIO-210ENST00000508283 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
TRIO-210ENST00000508283 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
TRIO-210ENST00000508283 TAF1DQ9H5J8 278 aaPredicted RBP11.08□□□□□ -0.64
TRIO-210ENST00000508283 TIAM2Q8IVF5 1701 aa11.08□□□□□ -0.64
TRIO-210ENST00000508283 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
TRIO-210ENST00000508283 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
TRIO-210ENST00000508283 FKBP4Q02790 459 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIO-210ENST00000508283 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
TRIO-210ENST00000508283 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
TRIO-210ENST00000508283 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
TRIO-210ENST00000508283 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
TRIO-210ENST00000508283 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
TRIO-210ENST00000508283 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
TRIO-210ENST00000508283 ERVV-1B6SEH8 477 aa11.06□□□□□ -0.64
TRIO-210ENST00000508283 FZD9O00144 591 aa11.06□□□□□ -0.64
TRIO-210ENST00000508283 ALDH1B1P30837 517 aa11.06□□□□□ -0.64
TRIO-210ENST00000508283 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
TRIO-210ENST00000508283 FAM177BA6PVY3 158 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 ANP32CO43423 234 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 MKRN1Q9UHC7 482 aaKnown RBP11.05□□□□□ -0.64
TRIO-210ENST00000508283 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
TRIO-210ENST00000508283 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
TRIO-210ENST00000508283 HOXA10P31260 410 aaPredicted RBP11.04□□□□□ -0.64
TRIO-210ENST00000508283 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
TRIO-210ENST00000508283 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
TRIO-210ENST00000508283 PSMD1Q99460 953 aa11.04□□□□□ -0.64
TRIO-210ENST00000508283 CAPN15O75808 1086 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
TRIO-210ENST00000508283 DDX10Q13206 875 aaKnown RBP11.03□□□□□ -0.64
TRIO-210ENST00000508283 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 NGEFQ8N5V2 710 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
TRIO-210ENST00000508283 HACL1Q9UJ83 578 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
TRIO-210ENST00000508283 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
TRIO-210ENST00000508283 EPHX2P34913 555 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 VEGFBP49765 207 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 CC2D2BQ6DHV5 1058 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
TRIO-210ENST00000508283 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 GPC2Q8N158 579 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
TRIO-210ENST00000508283 NYXQ9GZU5 481 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
TRIO-210ENST00000508283 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
TRIO-210ENST00000508283 SCN4AP35499 1836 aa11.01□□□□□ -0.65
TRIO-210ENST00000508283 FOXN1O15353 648 aa11.01□□□□□ -0.65
TRIO-210ENST00000508283 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms