RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 BTBD11A6QL63 1104 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 CHADLQ6NUI6 762 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 PRPF40BQ6NWY9 871 aaKnown RBP24.15■■□□□ 1.46
CLDND1-217ENST00000508071 MASTLQ96GX5 879 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 BCORQ6W2J9 1755 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 CEMIPQ8WUJ3 1361 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 NPC1L1Q9UHC9 1359 aa24.15■■□□□ 1.46
CLDND1-217ENST00000508071 ARFGEF2Q9Y6D5 1785 aa24.14■■□□□ 1.46
CLDND1-217ENST00000508071 SRGNP10124 158 aa24.14■■□□□ 1.45
CLDND1-217ENST00000508071 DZIP3Q86Y13 1208 aaKnown RBP24.14■■□□□ 1.45
CLDND1-217ENST00000508071 KCNQ3O43525 872 aa24.12■■□□□ 1.45
CLDND1-217ENST00000508071 DDNO94850 711 aaPredicted RBP24.12■■□□□ 1.45
CLDND1-217ENST00000508071 CREBZFQ9NS37 354 aa24.12■■□□□ 1.45
CLDND1-217ENST00000508071 PRKAR2BP31323 418 aa24.1■■□□□ 1.45
CLDND1-217ENST00000508071 NBPF5PQ86XG9 351 aaPredicted RBP24.1■■□□□ 1.45
CLDND1-217ENST00000508071 USP16Q9Y5T5 823 aa24.1■■□□□ 1.45
CLDND1-217ENST00000508071 IQCA1LA6NCM1 817 aa24.09■■□□□ 1.45
CLDND1-217ENST00000508071 CLEC4GQ6UXB4 293 aa24.09■■□□□ 1.45
CLDND1-217ENST00000508071 PHACTR3Q96KR7 559 aa24.09■■□□□ 1.45
CLDND1-217ENST00000508071 CFAP53Q96M91 514 aa24.09■■□□□ 1.45
CLDND1-217ENST00000508071 ZNF652Q9Y2D9 606 aa24.09■■□□□ 1.45
CLDND1-217ENST00000508071 POTEIP0CG38 1075 aa24.08■■□□□ 1.45
CLDND1-217ENST00000508071 POTEJP0CG39 1038 aa24.08■■□□□ 1.45
CLDND1-217ENST00000508071 PIP4K2AP48426 406 aaPredicted RBP24.08■■□□□ 1.45
CLDND1-217ENST00000508071 MKRN1Q9UHC7 482 aaKnown RBP24.08■■□□□ 1.45
CLDND1-217ENST00000508071 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
CLDND1-217ENST00000508071 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
CLDND1-217ENST00000508071 SCN4AP35499 1836 aa24.07■■□□□ 1.44
CLDND1-217ENST00000508071 SNRPA1P09661 255 aaKnown RBP24.06■■□□□ 1.44
CLDND1-217ENST00000508071 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
CLDND1-217ENST00000508071 PRAMEF22A3QJZ6 481 aa24.05■■□□□ 1.44
CLDND1-217ENST00000508071 NPR1P16066 1061 aa24.05■■□□□ 1.44
CLDND1-217ENST00000508071 LDHDQ86WU2 507 aa24.05■■□□□ 1.44
CLDND1-217ENST00000508071 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
CLDND1-217ENST00000508071 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
CLDND1-217ENST00000508071 TPTE2Q6XPS3 522 aa24.04■■□□□ 1.44
CLDND1-217ENST00000508071 L3MBTL3Q96JM7 780 aaPredicted RBP24.04■■□□□ 1.44
CLDND1-217ENST00000508071 FKBP4Q02790 459 aaKnown RBP eCLIP24.03■■□□□ 1.44
CLDND1-217ENST00000508071 TAF1DQ9H5J8 278 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-217ENST00000508071 MCM10Q7L590 875 aa24.02■■□□□ 1.44
CLDND1-217ENST00000508071 NIP7Q9Y221 180 aaKnown RBP eCLIP24.02■■□□□ 1.44
CLDND1-217ENST00000508071 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-217ENST00000508071 ZNF277Q9NRM2 450 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-217ENST00000508071 PASKQ96RG2 1323 aa24.01■■□□□ 1.43
CLDND1-217ENST00000508071 CNTNAP1P78357 1384 aa24.01■■□□□ 1.43
CLDND1-217ENST00000508071 FAM177BA6PVY3 158 aa24■■□□□ 1.43
CLDND1-217ENST00000508071 RGL2O15211 777 aa24■■□□□ 1.43
CLDND1-217ENST00000508071 U2AF1L5P0DN76 240 aaPredicted RBP24■■□□□ 1.43
CLDND1-217ENST00000508071 U2AF1Q01081 240 aaKnown RBP eCLIP24■■□□□ 1.43
CLDND1-217ENST00000508071 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
CLDND1-217ENST00000508071 EAPPQ56P03 285 aaPredicted RBP23.99■■□□□ 1.43
CLDND1-217ENST00000508071 NBPF26B4DH59 902 aa23.98■■□□□ 1.43
CLDND1-217ENST00000508071 NBPF10Q6P3W6 841 aaKnown RBP23.98■■□□□ 1.43
CLDND1-217ENST00000508071 NBPF15Q8N660 670 aa23.98■■□□□ 1.43
CLDND1-217ENST00000508071 HACL1Q9UJ83 578 aa23.98■■□□□ 1.43
CLDND1-217ENST00000508071 ZNF541Q9H0D2 1346 aa23.98■■□□□ 1.43
CLDND1-217ENST00000508071 TMEM88BA6NKF7 163 aa23.97■■□□□ 1.43
CLDND1-217ENST00000508071 GTF2E1P29083 439 aaPredicted RBP23.97■■□□□ 1.43
CLDND1-217ENST00000508071 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
CLDND1-217ENST00000508071 OLFM4Q6UX06 510 aa23.97■■□□□ 1.43
CLDND1-217ENST00000508071 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
CLDND1-217ENST00000508071 HTATSF1O43719 755 aaKnown RBP23.96■■□□□ 1.43
CLDND1-217ENST00000508071 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
CLDND1-217ENST00000508071 FOXN1O15353 648 aa23.95■■□□□ 1.42
CLDND1-217ENST00000508071 AIDAQ96BJ3 306 aa23.95■■□□□ 1.42
CLDND1-217ENST00000508071 ITGBL1O95965 494 aaPredicted RBP23.94■■□□□ 1.42
CLDND1-217ENST00000508071 EPHX2P34913 555 aa23.94■■□□□ 1.42
CLDND1-217ENST00000508071 IARSP41252 1262 aaKnown RBP23.94■■□□□ 1.42
CLDND1-217ENST00000508071 HLFQ16534 295 aa23.94■■□□□ 1.42
CLDND1-217ENST00000508071 SYNE4Q8N205 404 aa23.94■■□□□ 1.42
CLDND1-217ENST00000508071 VEGFBP49765 207 aa23.93■■□□□ 1.42
CLDND1-217ENST00000508071 TAF7Q15545 349 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-217ENST00000508071 PNMA8AQ86V59 439 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-217ENST00000508071 FZD9O00144 591 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 PPP2R1AP30153 589 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 NYXQ9GZU5 481 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 PRDM10Q9NQV6 1147 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 LAMB4A4D0S4 1761 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 ADAMTSL1Q8N6G6 1762 aa23.92■■□□□ 1.42
CLDND1-217ENST00000508071 RNF123Q5XPI4 1314 aa23.91■■□□□ 1.42
CLDND1-217ENST00000508071 CTCFP49711 727 aaPredicted RBP23.91■■□□□ 1.42
CLDND1-217ENST00000508071 JDP2Q8WYK2 163 aa23.91■■□□□ 1.42
CLDND1-217ENST00000508071 GPC2Q8N158 579 aa23.9■■□□□ 1.42
CLDND1-217ENST00000508071 MIS18AQ9NYP9 233 aa23.9■■□□□ 1.42
CLDND1-217ENST00000508071 NUP98P52948 1817 aa23.89■■□□□ 1.42
CLDND1-217ENST00000508071 MAP1SQ66K74 1059 aaPredicted RBP23.89■■□□□ 1.41
CLDND1-217ENST00000508071 CNTROBQ8N137 903 aa23.89■■□□□ 1.41
CLDND1-217ENST00000508071 NGEFQ8N5V2 710 aa23.89■■□□□ 1.41
CLDND1-217ENST00000508071 PSMD1Q99460 953 aa23.89■■□□□ 1.41
CLDND1-217ENST00000508071 ERVV-1B6SEH8 477 aa23.87■■□□□ 1.41
CLDND1-217ENST00000508071 EIF6P56537 245 aaKnown RBP23.87■■□□□ 1.41
CLDND1-217ENST00000508071 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
CLDND1-217ENST00000508071 CC2D2BQ6DHV5 1058 aa23.87■■□□□ 1.41
CLDND1-217ENST00000508071 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
CLDND1-217ENST00000508071 ABCC12Q96J65 1359 aa23.87■■□□□ 1.41
CLDND1-217ENST00000508071 NEFMP07197 916 aa23.86■■□□□ 1.41
CLDND1-217ENST00000508071 KIF6Q6ZMV9 814 aa23.86■■□□□ 1.41
CLDND1-217ENST00000508071 PNISRQ8TF01 805 aaKnown RBP23.86■■□□□ 1.41
CLDND1-217ENST00000508071 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
CLDND1-217ENST00000508071 WBP1LQ9NX94 342 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms