RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
TSPAN17-206ENST00000507471 HSPA1AP0DMV8 641 aaKnown RBP18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 HSPA1BP0DMV9 641 aaKnown RBP18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 ST5P78524 1137 aa18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 TNS4Q8IZW8 715 aa18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
TSPAN17-206ENST00000507471 MASTLQ96GX5 879 aa18.58■□□□□ 0.56
TSPAN17-206ENST00000507471 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
TSPAN17-206ENST00000507471 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
TSPAN17-206ENST00000507471 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
TSPAN17-206ENST00000507471 CAPN15O75808 1086 aa18.56■□□□□ 0.56
TSPAN17-206ENST00000507471 POTEIP0CG38 1075 aa18.56■□□□□ 0.56
TSPAN17-206ENST00000507471 POTEJP0CG39 1038 aa18.56■□□□□ 0.56
TSPAN17-206ENST00000507471 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
TSPAN17-206ENST00000507471 CHADLQ6NUI6 762 aa18.56■□□□□ 0.56
TSPAN17-206ENST00000507471 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
TSPAN17-206ENST00000507471 PCNTO95613 3336 aa18.54■□□□□ 0.56
TSPAN17-206ENST00000507471 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
TSPAN17-206ENST00000507471 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
TSPAN17-206ENST00000507471 CFAP53Q96M91 514 aa18.54■□□□□ 0.56
TSPAN17-206ENST00000507471 CREBZFQ9NS37 354 aa18.54■□□□□ 0.56
TSPAN17-206ENST00000507471 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
TSPAN17-206ENST00000507471 MCM10Q7L590 875 aa18.53■□□□□ 0.56
TSPAN17-206ENST00000507471 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
TSPAN17-206ENST00000507471 CCDC93Q567U6 631 aa18.52■□□□□ 0.56
TSPAN17-206ENST00000507471 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
TSPAN17-206ENST00000507471 SCN4AP35499 1836 aa18.51■□□□□ 0.55
TSPAN17-206ENST00000507471 NPR1P16066 1061 aa18.51■□□□□ 0.55
TSPAN17-206ENST00000507471 L3MBTL3Q96JM7 780 aaPredicted RBP18.51■□□□□ 0.55
TSPAN17-206ENST00000507471 MKRN1Q9UHC7 482 aaKnown RBP18.51■□□□□ 0.55
TSPAN17-206ENST00000507471 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
TSPAN17-206ENST00000507471 KLRG2A4D1S0 409 aaPredicted RBP18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 IQCA1LA6NCM1 817 aa18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 NIP7Q9Y221 180 aaKnown RBP eCLIP18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 LAMB4A4D0S4 1761 aa18.5■□□□□ 0.55
TSPAN17-206ENST00000507471 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
TSPAN17-206ENST00000507471 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
TSPAN17-206ENST00000507471 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
TSPAN17-206ENST00000507471 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
TSPAN17-206ENST00000507471 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
TSPAN17-206ENST00000507471 RGL2O15211 777 aa18.48■□□□□ 0.55
TSPAN17-206ENST00000507471 OLFM4Q6UX06 510 aa18.48■□□□□ 0.55
TSPAN17-206ENST00000507471 LDHDQ86WU2 507 aa18.48■□□□□ 0.55
TSPAN17-206ENST00000507471 ZNF277Q9NRM2 450 aaPredicted RBP18.48■□□□□ 0.55
TSPAN17-206ENST00000507471 CNTNAP1P78357 1384 aa18.47■□□□□ 0.55
TSPAN17-206ENST00000507471 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
TSPAN17-206ENST00000507471 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
TSPAN17-206ENST00000507471 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
TSPAN17-206ENST00000507471 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
TSPAN17-206ENST00000507471 HLFQ16534 295 aa18.46■□□□□ 0.55
TSPAN17-206ENST00000507471 RTKN2Q8IZC4 609 aa18.45■□□□□ 0.54
TSPAN17-206ENST00000507471 SNED1Q8TER0 1413 aa18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 ITGBL1O95965 494 aaPredicted RBP18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 HACL1Q9UJ83 578 aa18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
TSPAN17-206ENST00000507471 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
TSPAN17-206ENST00000507471 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
TSPAN17-206ENST00000507471 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
TSPAN17-206ENST00000507471 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 TMEM88BA6NKF7 163 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 FZD9O00144 591 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 FOXN1O15353 648 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 GTF2E1P29083 439 aaPredicted RBP18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 EPHX2P34913 555 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
TSPAN17-206ENST00000507471 CRY2Q49AN0 593 aa18.41■□□□□ 0.54
TSPAN17-206ENST00000507471 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
TSPAN17-206ENST00000507471 NUP98P52948 1817 aa18.41■□□□□ 0.54
TSPAN17-206ENST00000507471 VEGFBP49765 207 aa18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 PSMD1Q99460 953 aa18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 COL4A5P29400 1685 aa18.4■□□□□ 0.54
TSPAN17-206ENST00000507471 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
TSPAN17-206ENST00000507471 GPC2Q8N158 579 aa18.39■□□□□ 0.53
TSPAN17-206ENST00000507471 NYXQ9GZU5 481 aa18.39■□□□□ 0.53
TSPAN17-206ENST00000507471 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
TSPAN17-206ENST00000507471 MAP1SQ66K74 1059 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-206ENST00000507471 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
TSPAN17-206ENST00000507471 LTBP1Q14766 1721 aa18.37■□□□□ 0.53
TSPAN17-206ENST00000507471 TTLL7Q6ZT98 887 aa18.37■□□□□ 0.53
TSPAN17-206ENST00000507471 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
TSPAN17-206ENST00000507471 PNISRQ8TF01 805 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-206ENST00000507471 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
TSPAN17-206ENST00000507471 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms