RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 C16orf71Q8IYS4 520 aaPredicted RBP7.9□□□□□ -1.14
GYPB-205ENST00000505583 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
GYPB-205ENST00000505583 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 GLTPD2A6NH11 291 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 H0YIN7 160 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 CAMTA2O94983 1202 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 LMNB1P20700 586 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 TEFQ10587 303 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 FSTL1Q12841 308 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 SSUH2Q9Y2M2 353 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 USP16Q9Y5T5 823 aa7.89□□□□□ -1.15
GYPB-205ENST00000505583 C21orf2O43822 256 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 PRKAR2BP31323 418 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 IL6STP40189 918 aaPredicted RBP7.88□□□□□ -1.15
GYPB-205ENST00000505583 JMYQ8N9B5 988 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 ZNF622Q969S3 477 aaKnown RBP eCLIP7.88□□□□□ -1.15
GYPB-205ENST00000505583 BRIP1Q9BX63 1249 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
GYPB-205ENST00000505583 ZC3H4Q9UPT8 1303 aaKnown RBP7.87□□□□□ -1.15
GYPB-205ENST00000505583 A0A087WZG4 1122 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 VEGFAP15692 232 aaPredicted RBP7.87□□□□□ -1.15
GYPB-205ENST00000505583 DCTN1Q14203 1278 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
GYPB-205ENST00000505583 MCM10Q7L590 875 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 IFNLR1Q8IU57 520 aaPredicted RBP7.87□□□□□ -1.15
GYPB-205ENST00000505583 SMC1BQ8NDV3 1235 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
GYPB-205ENST00000505583 NBPF26B4DH59 902 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 POTEIP0CG38 1075 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 POTEJP0CG39 1038 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 PPP2R1AP30153 589 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 PDE6BP35913 854 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 NBPF10Q6P3W6 841 aaKnown RBP7.86□□□□□ -1.15
GYPB-205ENST00000505583 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
GYPB-205ENST00000505583 NBPF15Q8N660 670 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 SETDB2Q96T68 719 aa7.86□□□□□ -1.15
GYPB-205ENST00000505583 TEX13AQ9BXU3 409 aaPredicted RBP7.86□□□□□ -1.15
GYPB-205ENST00000505583 LAMB4A4D0S4 1761 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 SRGNP10124 158 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 ERFEQ4G0M1 354 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
GYPB-205ENST00000505583 OLFM4Q6UX06 510 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 CNBD1Q8NA66 436 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 MIS18AQ9NYP9 233 aa7.85□□□□□ -1.15
GYPB-205ENST00000505583 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.15
GYPB-205ENST00000505583 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
GYPB-205ENST00000505583 U2AF1L5P0DN76 240 aaPredicted RBP7.84□□□□□ -1.15
GYPB-205ENST00000505583 U2AF1Q01081 240 aaKnown RBP eCLIP7.84□□□□□ -1.15
GYPB-205ENST00000505583 STYK1Q6J9G0 422 aa7.84□□□□□ -1.15
GYPB-205ENST00000505583 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
GYPB-205ENST00000505583 TAOK3Q9H2K8 898 aa7.84□□□□□ -1.15
GYPB-205ENST00000505583 NUP98P52948 1817 aa7.84□□□□□ -1.15
GYPB-205ENST00000505583 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 PCNTO95613 3336 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 FAM177BA6PVY3 158 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 SNRPA1P09661 255 aaKnown RBP7.83□□□□□ -1.16
GYPB-205ENST00000505583 HLFQ16534 295 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 DPY19L2Q6NUT2 758 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
GYPB-205ENST00000505583 SCN4AP35499 1836 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 KLRG2A4D1S0 409 aaPredicted RBP7.82□□□□□ -1.16
GYPB-205ENST00000505583 NPHP1O15259 732 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 ST5P78524 1137 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
GYPB-205ENST00000505583 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 NIP7Q9Y221 180 aaKnown RBP eCLIP7.82□□□□□ -1.16
GYPB-205ENST00000505583 COL4A5P29400 1685 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 ADAMTSL1Q8N6G6 1762 aa7.82□□□□□ -1.16
GYPB-205ENST00000505583 ZNF541Q9H0D2 1346 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 SNED1Q8TER0 1413 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 HSPA1AP0DMV8 641 aaKnown RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 HSPA1BP0DMV9 641 aaKnown RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 CHADLQ6NUI6 762 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 NPM2Q86SE8 214 aaKnown RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 RTF1Q92541 710 aaKnown RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 THUMPD2Q9BTF0 503 aaKnown RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 ZNF277Q9NRM2 450 aaPredicted RBP7.81□□□□□ -1.16
GYPB-205ENST00000505583 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 ABCC12Q96J65 1359 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
GYPB-205ENST00000505583 HTATSF1O43719 755 aaKnown RBP7.8□□□□□ -1.16
GYPB-205ENST00000505583 NPR1P16066 1061 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 TAF7Q15545 349 aaPredicted RBP7.8□□□□□ -1.16
GYPB-205ENST00000505583 TPTE2Q6XPS3 522 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 TTLL7Q6ZT98 887 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 NUTM1Q86Y26 1132 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 NGEFQ8N5V2 710 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 PLEKHF1Q96S99 279 aa7.8□□□□□ -1.16
GYPB-205ENST00000505583 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
GYPB-205ENST00000505583 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms