RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 SLC16A10Q8TF71 515 aa10.71□□□□□ -0.69
RFC1-207ENST00000504554 AK7Q96M32 723 aa10.71□□□□□ -0.69
RFC1-207ENST00000504554 MAP3K5Q99683 1374 aa10.71□□□□□ -0.69
RFC1-207ENST00000504554 FHDC1Q9C0D6 1143 aaPredicted RBP10.71□□□□□ -0.69
RFC1-207ENST00000504554 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
RFC1-207ENST00000504554 SCN11AQ9UI33 1791 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 GNAT3A8MTJ3 354 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 GNPATO15228 680 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 FCHSD2O94868 740 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 RALBP1Q15311 655 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 ARXQ96QS3 562 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 PLEKHF1Q96S99 279 aa10.7□□□□□ -0.7
RFC1-207ENST00000504554 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 CEMIPQ8WUJ3 1361 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 KCNQ3O43525 872 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
RFC1-207ENST00000504554 DCTN1Q14203 1278 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 DNAJC10Q8IXB1 793 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 COL24A1Q17RW2 1714 aa10.69□□□□□ -0.7
RFC1-207ENST00000504554 CNTNAP4Q9C0A0 1308 aa10.68□□□□□ -0.7
RFC1-207ENST00000504554 SSFA2P28290 1259 aa10.68□□□□□ -0.7
RFC1-207ENST00000504554 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
RFC1-207ENST00000504554 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
RFC1-207ENST00000504554 MCM10Q7L590 875 aa10.68□□□□□ -0.7
RFC1-207ENST00000504554 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
RFC1-207ENST00000504554 UBR3Q6ZT12 1888 aa10.68□□□□□ -0.7
RFC1-207ENST00000504554 TJP1Q07157 1748 aa10.67□□□□□ -0.7
RFC1-207ENST00000504554 ZNF831Q5JPB2 1677 aa10.67□□□□□ -0.7
RFC1-207ENST00000504554 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
RFC1-207ENST00000504554 CRKLP46109 303 aaKnown RBP10.67□□□□□ -0.7
RFC1-207ENST00000504554 GPR153Q6NV75 609 aa10.67□□□□□ -0.7
RFC1-207ENST00000504554 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
RFC1-207ENST00000504554 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
RFC1-207ENST00000504554 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
RFC1-207ENST00000504554 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
RFC1-207ENST00000504554 RPS6KA4O75676 772 aa10.66□□□□□ -0.7
RFC1-207ENST00000504554 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
RFC1-207ENST00000504554 VARS2Q5ST30 1063 aaKnown RBP10.66□□□□□ -0.7
RFC1-207ENST00000504554 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
RFC1-207ENST00000504554 ZNF496Q96IT1 587 aaPredicted RBP10.66□□□□□ -0.7
RFC1-207ENST00000504554 PRKRIP1Q9H875 184 aaPredicted RBP10.66□□□□□ -0.7
RFC1-207ENST00000504554 POLD1P28340 1107 aa10.65□□□□□ -0.7
RFC1-207ENST00000504554 TEFQ10587 303 aa10.65□□□□□ -0.7
RFC1-207ENST00000504554 ZNF790Q6PG37 636 aa10.65□□□□□ -0.7
RFC1-207ENST00000504554 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.7
RFC1-207ENST00000504554 RTCBQ9Y3I0 505 aaKnown RBP10.65□□□□□ -0.7
RFC1-207ENST00000504554 CICQ96RK0 1608 aaPredicted RBP10.65□□□□□ -0.7
RFC1-207ENST00000504554 MYH14Q7Z406 1995 aaKnown RBP10.65□□□□□ -0.71
RFC1-207ENST00000504554 PRAMEF22A3QJZ6 481 aa10.64□□□□□ -0.71
RFC1-207ENST00000504554 GYS1P13807 737 aa10.64□□□□□ -0.71
RFC1-207ENST00000504554 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
RFC1-207ENST00000504554 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
RFC1-207ENST00000504554 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
RFC1-207ENST00000504554 SIPA1L3O60292 1781 aaPredicted RBP10.64□□□□□ -0.71
RFC1-207ENST00000504554 SOS1Q07889 1333 aaPredicted RBP10.63□□□□□ -0.71
RFC1-207ENST00000504554 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
RFC1-207ENST00000504554 BTBD11A6QL63 1104 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
RFC1-207ENST00000504554 NFE2L2Q16236 605 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 HEG1Q9ULI3 1381 aa10.63□□□□□ -0.71
RFC1-207ENST00000504554 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
RFC1-207ENST00000504554 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
RFC1-207ENST00000504554 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
RFC1-207ENST00000504554 CCDC146Q8IYE0 955 aa10.62□□□□□ -0.71
RFC1-207ENST00000504554 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
RFC1-207ENST00000504554 RTF1Q92541 710 aaKnown RBP10.62□□□□□ -0.71
RFC1-207ENST00000504554 MMP10P09238 476 aa10.61□□□□□ -0.71
RFC1-207ENST00000504554 RFC4P35249 363 aa10.61□□□□□ -0.71
RFC1-207ENST00000504554 ADAMTS8Q9UP79 889 aa10.61□□□□□ -0.71
RFC1-207ENST00000504554 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
RFC1-207ENST00000504554 USP42Q9H9J4 1324 aaKnown RBP10.6□□□□□ -0.71
RFC1-207ENST00000504554 KIF3CO14782 793 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 A1BGP04217 495 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 CANXP27824 592 aaKnown RBP10.6□□□□□ -0.71
RFC1-207ENST00000504554 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
RFC1-207ENST00000504554 DDR1Q08345 913 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 ARSIQ5FYB1 569 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 USPL1Q5W0Q7 1092 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 FMNL2Q96PY5 1086 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
RFC1-207ENST00000504554 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
RFC1-207ENST00000504554 C4AP0C0L4 1744 aa10.59□□□□□ -0.71
RFC1-207ENST00000504554 YBX3P16989 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
RFC1-207ENST00000504554 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
RFC1-207ENST00000504554 EIF5P55010 431 aaKnown RBP10.59□□□□□ -0.71
RFC1-207ENST00000504554 TAF7Q15545 349 aaPredicted RBP10.59□□□□□ -0.71
RFC1-207ENST00000504554 CD2APQ9Y5K6 639 aa10.59□□□□□ -0.71
RFC1-207ENST00000504554 COL15A1P39059 1388 aa10.59□□□□□ -0.71
RFC1-207ENST00000504554 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.71
RFC1-207ENST00000504554 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 TM4SF1P30408 202 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 RIPK4P57078 832 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 NLGN1Q8N2Q7 840 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.726e-7■■■■□ 21.8
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms