RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 LTKP29376 864 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 HS1BP3Q53T59 392 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 CLEC17AQ6ZS10 378 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 KIF1BPQ96EK5 621 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 DLC1Q96QB1 1528 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 PAX3P23760 479 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 ZSCAN26Q16670 478 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 PTPRUQ92729 1446 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 ARHGEF28Q8N1W1 1705 aaKnown RBP4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 PDIA5Q14554 519 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 MUM1L1Q5H9M0 696 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 DZIP3Q86Y13 1208 aaKnown RBP4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 ZNF483Q8TF39 744 aaPredicted RBP4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 PIK3R5Q8WYR1 880 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 SLC35B4Q969S0 331 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 PIK3C2GO75747 1445 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 IL16Q14005 1332 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 MINK1Q8N4C8 1332 aaPredicted RBP4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 ZNF335Q9H4Z2 1342 aaPredicted RBP4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 ADGRB1O14514 1584 aa4.4□□□□□ -1.71
PCDH11X-208ENST00000504220 MARF1Q9Y4F3 1742 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 ROCK2O75116 1388 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TMEM62Q0P6H9 643 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 GET4Q7L5D6 327 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 SUGP1Q8IWZ8 645 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TOPAZ1Q8N9V7 1692 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 PHLPP1O60346 1717 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 MAGEA10P43363 369 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TRIM74Q86UV6 250 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TRIM73Q86UV7 250 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 PMFBP1Q8TBY8 1022 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 NEK9Q8TD19 979 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 LNPKQ9C0E8 428 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 IRF2BPLQ9H1B7 796 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TBC1D2BQ9UPU7 963 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 CRYBG1Q9Y4K1 1723 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 SYNRGQ9UMZ2 1314 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 ZC3H4Q9UPT8 1303 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 KIF1AQ12756 1690 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 MED1Q15648 1581 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 PES1O00541 588 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 MCM4P33991 863 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 FOSBP53539 338 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 TTC19Q6DKK2 380 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 CLEC4GQ6UXB4 293 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 KLHL23Q8NBE8 558 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 PANK1Q8TE04 598 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 NBPF3Q9H094 633 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 RTEL1Q9NZ71 1219 aa4.39□□□□□ -1.71
PCDH11X-208ENST00000504220 ZSCAN9O15535 394 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 NCBP1Q09161 790 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 ARHGAP27Q6ZUM4 889 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 ELOA2Q8IYF1 753 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 HELBQ8NG08 1087 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 ZNF396Q96N95 335 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 TOMM22Q9NS69 142 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 ABCA3Q99758 1704 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 BMS1Q14692 1282 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 SPTLC3Q9NUV7 552 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 FAM135BQ49AJ0 1406 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 OATP04181 439 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 GTF2A1P52655 376 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 CDC37L1Q7L3B6 337 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 ZNF771Q7L3S4 317 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 PROSER2Q86WR7 435 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 OGFRQ9NZT2 677 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 USP32Q8NFA0 1604 aa4.38□□□□□ -1.71
PCDH11X-208ENST00000504220 KIF3CO14782 793 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 ECM2O94769 699 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 PIP4K2BP78356 416 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 IFT88Q13099 833 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 APBB1IPQ7Z5R6 666 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 FAM184AQ8NB25 1140 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 NOC3LQ8WTT2 800 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 SYAP1Q96A49 352 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 TBX22Q9Y458 520 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 TRPM1Q7Z4N2 1603 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 EXOC5O00471 708 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 MAGEA8P43361 318 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 NBPF8Q3BBV2 869 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 PLEKHO1Q53GL0 409 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 GORABQ5T7V8 394 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 MCTP1Q6DN14 999 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 CENPQQ7L2Z9 268 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 REXO1L1PQ8IX06 675 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 KIF18AQ8NI77 898 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 CEP126Q9P2H0 1117 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 ZKSCAN5Q9Y2L8 839 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 KIF3AQ9Y496 699 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 ANKRD30BQ9BXX2 1392 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 ITSN1Q15811 1721 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 EPB41L2O43491 1005 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 NAT2P11245 290 aa4.37□□□□□ -1.71
PCDH11X-208ENST00000504220 KCNA6P17658 529 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms