RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
LSM6-204ENST00000504181 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
LSM6-204ENST00000504181 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
LSM6-204ENST00000504181 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
LSM6-204ENST00000504181 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
LSM6-204ENST00000504181 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
LSM6-204ENST00000504181 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
LSM6-204ENST00000504181 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
LSM6-204ENST00000504181 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
LSM6-204ENST00000504181 CA12O43570 354 aa17.44■□□□□ 0.38
LSM6-204ENST00000504181 MAP2K2P36507 400 aa17.44■□□□□ 0.38
LSM6-204ENST00000504181 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
LSM6-204ENST00000504181 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
LSM6-204ENST00000504181 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
LSM6-204ENST00000504181 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
LSM6-204ENST00000504181 TLL2Q9Y6L7 1015 aa17.43■□□□□ 0.38
LSM6-204ENST00000504181 TRAF5O00463 557 aa17.42■□□□□ 0.38
LSM6-204ENST00000504181 CST9Q5W186 159 aa17.42■□□□□ 0.38
LSM6-204ENST00000504181 STYK1Q6J9G0 422 aa17.42■□□□□ 0.38
LSM6-204ENST00000504181 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
LSM6-204ENST00000504181 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
LSM6-204ENST00000504181 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
LSM6-204ENST00000504181 NPHP1O15259 732 aa17.4■□□□□ 0.38
LSM6-204ENST00000504181 SRGNP10124 158 aa17.4■□□□□ 0.38
LSM6-204ENST00000504181 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
LSM6-204ENST00000504181 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
LSM6-204ENST00000504181 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
LSM6-204ENST00000504181 GPC2Q8N158 579 aa17.39■□□□□ 0.37
LSM6-204ENST00000504181 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
LSM6-204ENST00000504181 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
LSM6-204ENST00000504181 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
LSM6-204ENST00000504181 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
LSM6-204ENST00000504181 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
LSM6-204ENST00000504181 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
LSM6-204ENST00000504181 FZD9O00144 591 aa17.37■□□□□ 0.37
LSM6-204ENST00000504181 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
LSM6-204ENST00000504181 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
LSM6-204ENST00000504181 GJA3Q9Y6H8 435 aa17.37■□□□□ 0.37
LSM6-204ENST00000504181 MRC1P22897 1456 aa17.37■□□□□ 0.37
LSM6-204ENST00000504181 COL4A5P29400 1685 aa17.36■□□□□ 0.37
LSM6-204ENST00000504181 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
LSM6-204ENST00000504181 ST5P78524 1137 aa17.36■□□□□ 0.37
LSM6-204ENST00000504181 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
LSM6-204ENST00000504181 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
LSM6-204ENST00000504181 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
LSM6-204ENST00000504181 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
LSM6-204ENST00000504181 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
LSM6-204ENST00000504181 A0A087WZG4 1122 aa17.34■□□□□ 0.37
LSM6-204ENST00000504181 POLR2AP24928 1970 aaKnown RBP17.34■□□□□ 0.37
LSM6-204ENST00000504181 EPS15P42566 896 aa17.34■□□□□ 0.37
LSM6-204ENST00000504181 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
LSM6-204ENST00000504181 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
LSM6-204ENST00000504181 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.36
LSM6-204ENST00000504181 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
LSM6-204ENST00000504181 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
LSM6-204ENST00000504181 ZIC5Q96T25 663 aa17.32■□□□□ 0.36
LSM6-204ENST00000504181 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
LSM6-204ENST00000504181 SCNN1DP51172 638 aa17.31■□□□□ 0.36
LSM6-204ENST00000504181 RTKN2Q8IZC4 609 aa17.31■□□□□ 0.36
LSM6-204ENST00000504181 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
LSM6-204ENST00000504181 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
LSM6-204ENST00000504181 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
LSM6-204ENST00000504181 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
LSM6-204ENST00000504181 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
LSM6-204ENST00000504181 HHIPL1Q96JK4 782 aa17.3■□□□□ 0.36
LSM6-204ENST00000504181 NPR1P16066 1061 aa17.29■□□□□ 0.36
LSM6-204ENST00000504181 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
LSM6-204ENST00000504181 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
LSM6-204ENST00000504181 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
LSM6-204ENST00000504181 STARD3NLO95772 234 aa17.28■□□□□ 0.36
LSM6-204ENST00000504181 HABP4Q5JVS0 413 aaKnown RBP17.28■□□□□ 0.36
LSM6-204ENST00000504181 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
LSM6-204ENST00000504181 NOGQ13253 232 aa17.27■□□□□ 0.36
LSM6-204ENST00000504181 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
LSM6-204ENST00000504181 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.36
LSM6-204ENST00000504181 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
LSM6-204ENST00000504181 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
LSM6-204ENST00000504181 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
LSM6-204ENST00000504181 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
LSM6-204ENST00000504181 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
LSM6-204ENST00000504181 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
LSM6-204ENST00000504181 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
LSM6-204ENST00000504181 PSMD1Q99460 953 aa17.24■□□□□ 0.35
LSM6-204ENST00000504181 CTU1Q7Z7A3 348 aaKnown RBP17.23■□□□□ 0.35
LSM6-204ENST00000504181 ADARB2Q9NS39 739 aaKnown RBP17.23■□□□□ 0.35
LSM6-204ENST00000504181 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
LSM6-204ENST00000504181 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
LSM6-204ENST00000504181 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
LSM6-204ENST00000504181 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
LSM6-204ENST00000504181 TRPA1O75762 1119 aa17.21■□□□□ 0.35
LSM6-204ENST00000504181 HUNKP57058 714 aa17.21■□□□□ 0.35
LSM6-204ENST00000504181 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
LSM6-204ENST00000504181 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
LSM6-204ENST00000504181 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
LSM6-204ENST00000504181 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
LSM6-204ENST00000504181 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
LSM6-204ENST00000504181 RNF186Q9NXI6 227 aa17.2■□□□□ 0.34
LSM6-204ENST00000504181 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
LSM6-204ENST00000504181 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
LSM6-204ENST00000504181 NUP98P52948 1817 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms