RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 CCDC146Q8IYE0 955 aa23.21■■□□□ 1.31
SMN1-203ENST00000503079 SETDB2Q96T68 719 aa23.21■■□□□ 1.31
SMN1-203ENST00000503079 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
SMN1-203ENST00000503079 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
SMN1-203ENST00000503079 LAMB2P55268 1798 aa23.2■■□□□ 1.3
SMN1-203ENST00000503079 WDR90Q96KV7 1748 aa23.2■■□□□ 1.3
SMN1-203ENST00000503079 H0YIN7 160 aa23.2■■□□□ 1.3
SMN1-203ENST00000503079 CNBD1Q8NA66 436 aa23.2■■□□□ 1.3
SMN1-203ENST00000503079 SRGNP10124 158 aa23.19■■□□□ 1.3
SMN1-203ENST00000503079 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
SMN1-203ENST00000503079 CLEC4GQ6UXB4 293 aa23.19■■□□□ 1.3
SMN1-203ENST00000503079 ZNF219Q9P2Y4 722 aaPredicted RBP23.19■■□□□ 1.3
SMN1-203ENST00000503079 SNED1Q8TER0 1413 aa23.18■■□□□ 1.3
SMN1-203ENST00000503079 C21orf2O43822 256 aa23.18■■□□□ 1.3
SMN1-203ENST00000503079 HSPA6P17066 643 aa23.18■■□□□ 1.3
SMN1-203ENST00000503079 PDIA6Q15084 440 aa23.18■■□□□ 1.3
SMN1-203ENST00000503079 ZNF622Q969S3 477 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMN1-203ENST00000503079 UBN2Q6ZU65 1347 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 RIPK4P57078 832 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 PROSER3Q2NL68 480 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 OLFM4Q6UX06 510 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 NGEFQ8N5V2 710 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
SMN1-203ENST00000503079 PDE6BP35913 854 aa23.16■■□□□ 1.3
SMN1-203ENST00000503079 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
SMN1-203ENST00000503079 NIP7Q9Y221 180 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMN1-203ENST00000503079 KLRG2A4D1S0 409 aaPredicted RBP23.15■■□□□ 1.3
SMN1-203ENST00000503079 FAM177BA6PVY3 158 aa23.15■■□□□ 1.3
SMN1-203ENST00000503079 ANXA1P04083 346 aa23.15■■□□□ 1.3
SMN1-203ENST00000503079 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
SMN1-203ENST00000503079 PNISRQ8TF01 805 aaKnown RBP23.15■■□□□ 1.3
SMN1-203ENST00000503079 COL4A5P29400 1685 aa23.14■■□□□ 1.29
SMN1-203ENST00000503079 POTECB2RU33 542 aa23.14■■□□□ 1.29
SMN1-203ENST00000503079 MYL6BP14649 208 aa23.14■■□□□ 1.29
SMN1-203ENST00000503079 PRKRIP1Q9H875 184 aaPredicted RBP23.14■■□□□ 1.29
SMN1-203ENST00000503079 MAP3K15Q6ZN16 1313 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 LMNB1P20700 586 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 STYK1Q6J9G0 422 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 NBPF5PQ86XG9 351 aaPredicted RBP23.13■■□□□ 1.29
SMN1-203ENST00000503079 RRAGCQ9HB90 399 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 ADAMTS8Q9UP79 889 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 TAF1P21675 1872 aa23.13■■□□□ 1.29
SMN1-203ENST00000503079 RGL2O15211 777 aa23.12■■□□□ 1.29
SMN1-203ENST00000503079 TOMM70O94826 608 aa23.12■■□□□ 1.29
SMN1-203ENST00000503079 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
SMN1-203ENST00000503079 ST5P78524 1137 aa23.11■■□□□ 1.29
SMN1-203ENST00000503079 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
SMN1-203ENST00000503079 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
SMN1-203ENST00000503079 COL4A1P02462 1669 aa23.1■■□□□ 1.29
SMN1-203ENST00000503079 NEFMP07197 916 aa23.1■■□□□ 1.29
SMN1-203ENST00000503079 CCDC184Q52MB2 194 aa23.1■■□□□ 1.29
SMN1-203ENST00000503079 C3orf67Q6ZVT6 689 aa23.1■■□□□ 1.29
SMN1-203ENST00000503079 MASTLQ96GX5 879 aa23.1■■□□□ 1.29
SMN1-203ENST00000503079 HTRA3P83110 453 aa23.09■■□□□ 1.29
SMN1-203ENST00000503079 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
SMN1-203ENST00000503079 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
SMN1-203ENST00000503079 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.29
SMN1-203ENST00000503079 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 GPTP24298 496 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 ERFEQ4G0M1 354 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
SMN1-203ENST00000503079 PDZRN3Q9UPQ7 1066 aa23.08■■□□□ 1.29
SMN1-203ENST00000503079 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.28
SMN1-203ENST00000503079 GLTPD2A6NH11 291 aa23.07■■□□□ 1.28
SMN1-203ENST00000503079 CHL1O00533 1208 aa23.07■■□□□ 1.28
SMN1-203ENST00000503079 ZNF34Q8IZ26 560 aa23.07■■□□□ 1.28
SMN1-203ENST00000503079 PCNTO95613 3336 aa23.07■■□□□ 1.28
SMN1-203ENST00000503079 RIC1Q4ADV7 1423 aa23.07■■□□□ 1.28
SMN1-203ENST00000503079 NTSR2O95665 410 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 RBM46Q8TBY0 533 aaKnown RBP23.06■■□□□ 1.28
SMN1-203ENST00000503079 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 CNKSR1Q969H4 720 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
SMN1-203ENST00000503079 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
SMN1-203ENST00000503079 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
SMN1-203ENST00000503079 DNAJC5GQ8N7S2 189 aa23.05■■□□□ 1.28
SMN1-203ENST00000503079 ERBB4Q15303 1308 aa23.05■■□□□ 1.28
SMN1-203ENST00000503079 IBTKQ9P2D0 1353 aaPredicted RBP23.04■■□□□ 1.28
SMN1-203ENST00000503079 NPR1P16066 1061 aa23.04■■□□□ 1.28
SMN1-203ENST00000503079 TPTE2Q6XPS3 522 aa23.04■■□□□ 1.28
SMN1-203ENST00000503079 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
SMN1-203ENST00000503079 NPHP1O15259 732 aa23.03■■□□□ 1.28
SMN1-203ENST00000503079 TAOK3Q9H2K8 898 aa23.03■■□□□ 1.28
SMN1-203ENST00000503079 LTBP1Q14766 1721 aa23.02■■□□□ 1.28
SMN1-203ENST00000503079 ADAMTSL1Q8N6G6 1762 aa23.02■■□□□ 1.28
SMN1-203ENST00000503079 BABAM1Q9NWV8 329 aa23.02■■□□□ 1.28
SMN1-203ENST00000503079 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
SMN1-203ENST00000503079 SYNE4Q8N205 404 aa23.01■■□□□ 1.27
SMN1-203ENST00000503079 POTEIP0CG38 1075 aa23■■□□□ 1.27
SMN1-203ENST00000503079 POTEJP0CG39 1038 aa23■■□□□ 1.27
SMN1-203ENST00000503079 SCN4AP35499 1836 aa22.99■■□□□ 1.27
SMN1-203ENST00000503079 DDNO94850 711 aaPredicted RBP22.99■■□□□ 1.27
SMN1-203ENST00000503079 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
SMN1-203ENST00000503079 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms