RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 LINC00116Q8NCU8 138 aa29.77■■■□□ 2.36
HMCES-204ENST00000502878 MYD88Q99836 296 aa29.77■■■□□ 2.36
HMCES-204ENST00000502878 ALDH1L1O75891 902 aa29.76■■■□□ 2.35
HMCES-204ENST00000502878 IGKV5-2P06315 115 aa29.76■■■□□ 2.35
HMCES-204ENST00000502878 ZBTB3Q9H5J0 574 aa29.76■■■□□ 2.35
HMCES-204ENST00000502878 RWDD1Q9H446 243 aaPredicted RBP29.75■■■□□ 2.35
HMCES-204ENST00000502878 GNAI3P08754 354 aa29.75■■■□□ 2.35
HMCES-204ENST00000502878 IL6STP40189 918 aaPredicted RBP29.75■■■□□ 2.35
HMCES-204ENST00000502878 NEXNQ0ZGT2 675 aa29.75■■■□□ 2.35
HMCES-204ENST00000502878 CCNL1Q9UK58 526 aaPredicted RBP29.74■■■□□ 2.35
HMCES-204ENST00000502878 EP400Q96L91 3159 aa29.74■■■□□ 2.35
HMCES-204ENST00000502878 ARFGEF2Q9Y6D5 1785 aa29.74■■■□□ 2.35
HMCES-204ENST00000502878 HDAC1Q13547 482 aaPredicted RBP29.73■■■□□ 2.35
HMCES-204ENST00000502878 ARXQ96QS3 562 aa29.73■■■□□ 2.35
HMCES-204ENST00000502878 COL5A3P25940 1745 aaPredicted RBP29.73■■■□□ 2.35
HMCES-204ENST00000502878 SIRT2Q8IXJ6 389 aa29.72■■■□□ 2.35
HMCES-204ENST00000502878 NBPF7P0C2Y1 421 aaPredicted RBP29.72■■■□□ 2.35
HMCES-204ENST00000502878 EIF5P55010 431 aaKnown RBP29.72■■■□□ 2.35
HMCES-204ENST00000502878 KIF6Q6ZMV9 814 aa29.72■■■□□ 2.35
HMCES-204ENST00000502878 RREB1Q92766 1687 aa29.71■■■□□ 2.35
HMCES-204ENST00000502878 NEURL1BA8MQ27 555 aa29.71■■■□□ 2.35
HMCES-204ENST00000502878 GNAI2P04899 355 aa29.71■■■□□ 2.35
HMCES-204ENST00000502878 UBTFL1P0CB47 393 aaPredicted RBP29.71■■■□□ 2.35
HMCES-204ENST00000502878 LY75O60449 1722 aa29.71■■■□□ 2.35
HMCES-204ENST00000502878 NUP188Q5SRE5 1749 aa29.71■■■□□ 2.35
HMCES-204ENST00000502878 ATP5J2-PTCD1G3V325 749 aa29.7■■■□□ 2.35
HMCES-204ENST00000502878 MYH14Q7Z406 1995 aaKnown RBP29.7■■■□□ 2.35
HMCES-204ENST00000502878 CEP85Q6P2H3 762 aa29.69■■■□□ 2.34
HMCES-204ENST00000502878 NPM2Q86SE8 214 aaKnown RBP29.68■■■□□ 2.34
HMCES-204ENST00000502878 C9orf78Q9NZ63 289 aaPredicted RBP29.68■■■□□ 2.34
HMCES-204ENST00000502878 LRRFIP2Q9Y608 721 aaKnown RBP29.68■■■□□ 2.34
HMCES-204ENST00000502878 MAP3K15Q6ZN16 1313 aa29.68■■■□□ 2.34
HMCES-204ENST00000502878 ANKRD44Q8N8A2 993 aa29.68■■■□□ 2.34
HMCES-204ENST00000502878 GCKRQ14397 625 aa29.67■■■□□ 2.34
HMCES-204ENST00000502878 TBC1D2BQ9UPU7 963 aa29.67■■■□□ 2.34
HMCES-204ENST00000502878 CNTNAP4Q9C0A0 1308 aa29.67■■■□□ 2.34
HMCES-204ENST00000502878 ILDR1Q86SU0 546 aaPredicted RBP29.66■■■□□ 2.34
HMCES-204ENST00000502878 DZIP3Q86Y13 1208 aaKnown RBP29.66■■■□□ 2.34
HMCES-204ENST00000502878 RPAP2Q8IXW5 612 aaPredicted RBP29.66■■■□□ 2.34
HMCES-204ENST00000502878 GRM8O00222 908 aa29.66■■■□□ 2.34
HMCES-204ENST00000502878 LRRC4BQ9NT99 713 aa29.65■■■□□ 2.34
HMCES-204ENST00000502878 HLFQ16534 295 aa29.64■■■□□ 2.34
HMCES-204ENST00000502878 TCIRG1Q13488 830 aa29.64■■■□□ 2.34
HMCES-204ENST00000502878 SKAP1Q86WV1 359 aa29.64■■■□□ 2.34
HMCES-204ENST00000502878 UTYO14607 1347 aa29.64■■■□□ 2.34
HMCES-204ENST00000502878 IBTKQ9P2D0 1353 aaPredicted RBP29.64■■■□□ 2.34
HMCES-204ENST00000502878 RC3H1Q5TC82 1133 aaKnown RBP29.63■■■□□ 2.33
HMCES-204ENST00000502878 GIGYF2Q6Y7W6 1299 aaKnown RBP29.63■■■□□ 2.33
HMCES-204ENST00000502878 COL15A1P39059 1388 aa29.61■■■□□ 2.33
HMCES-204ENST00000502878 ISCA1Q9BUE6 129 aa29.61■■■□□ 2.33
HMCES-204ENST00000502878 ERVV-1B6SEH8 477 aa29.61■■■□□ 2.33
HMCES-204ENST00000502878 AFDNP55196 1824 aaKnown RBP29.6■■■□□ 2.33
HMCES-204ENST00000502878 SMIM5Q71RC9 77 aa29.6■■■□□ 2.33
HMCES-204ENST00000502878 JARID2Q92833 1246 aaPredicted RBP29.6■■■□□ 2.33
HMCES-204ENST00000502878 TAF1LQ8IZX4 1826 aa29.6■■■□□ 2.33
HMCES-204ENST00000502878 SMC5Q8IY18 1101 aa29.59■■■□□ 2.33
HMCES-204ENST00000502878 CWC25Q9NXE8 425 aaPredicted RBP29.59■■■□□ 2.33
HMCES-204ENST00000502878 A0A087WZG4 1122 aa29.59■■■□□ 2.33
HMCES-204ENST00000502878 APBA3O96018 575 aa29.59■■■□□ 2.33
HMCES-204ENST00000502878 ATP8B2P98198 1209 aa29.59■■■□□ 2.33
HMCES-204ENST00000502878 CCDC191Q8NCU4 936 aa29.59■■■□□ 2.33
HMCES-204ENST00000502878 GNPATO15228 680 aa29.58■■■□□ 2.33
HMCES-204ENST00000502878 RPS6KA4O75676 772 aa29.58■■■□□ 2.33
HMCES-204ENST00000502878 SLC27A3Q5K4L6 730 aa29.58■■■□□ 2.33
HMCES-204ENST00000502878 SUCLG2Q96I99 432 aa29.58■■■□□ 2.33
HMCES-204ENST00000502878 PNMA6EA0A0J9YXQ4 647 aa29.57■■■□□ 2.32
HMCES-204ENST00000502878 CAMTA2O94983 1202 aa29.57■■■□□ 2.32
HMCES-204ENST00000502878 PROM2Q8N271 834 aa29.57■■■□□ 2.32
HMCES-204ENST00000502878 KAZALD1Q96I82 304 aa29.57■■■□□ 2.32
HMCES-204ENST00000502878 TRIM28Q13263 835 aaKnown RBP29.56■■■□□ 2.32
HMCES-204ENST00000502878 TXNRD1Q16881 649 aa29.56■■■□□ 2.32
HMCES-204ENST00000502878 UBE3BQ7Z3V4 1068 aa29.56■■■□□ 2.32
HMCES-204ENST00000502878 C4BP0C0L5 1744 aa29.56■■■□□ 2.32
HMCES-204ENST00000502878 HSP90AB3PQ58FF7 597 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 AMIGO3Q86WK7 504 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 PLSCR1O15162 318 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 HMMRO75330 724 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 GPTP24298 496 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 PDZRN3Q9UPQ7 1066 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 HDAC5Q9UQL6 1122 aa29.55■■■□□ 2.32
HMCES-204ENST00000502878 H7C1W4 665 aa29.54■■■□□ 2.32
HMCES-204ENST00000502878 CASP7P55210 303 aa29.54■■■□□ 2.32
HMCES-204ENST00000502878 GCC1Q96CN9 775 aa29.54■■■□□ 2.32
HMCES-204ENST00000502878 PPP1R42Q7Z4L9 355 aa29.53■■■□□ 2.32
HMCES-204ENST00000502878 DCTPP1Q9H773 170 aa29.53■■■□□ 2.32
HMCES-204ENST00000502878 RTCBQ9Y3I0 505 aaKnown RBP29.53■■■□□ 2.32
HMCES-204ENST00000502878 RTL5Q5HYW3 569 aaPredicted RBP29.52■■■□□ 2.32
HMCES-204ENST00000502878 AK7Q96M32 723 aa29.52■■■□□ 2.32
HMCES-204ENST00000502878 BICC1Q9H694 974 aaKnown RBP29.52■■■□□ 2.32
HMCES-204ENST00000502878 NUP98P52948 1817 aa29.52■■■□□ 2.32
HMCES-204ENST00000502878 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
HMCES-204ENST00000502878 NLRP10Q86W26 655 aa29.51■■■□□ 2.31
HMCES-204ENST00000502878 ZNF34Q8IZ26 560 aa29.51■■■□□ 2.31
HMCES-204ENST00000502878 EPHA10Q5JZY3 1008 aa29.5■■■□□ 2.31
HMCES-204ENST00000502878 SSH3Q8TE77 659 aa29.5■■■□□ 2.31
HMCES-204ENST00000502878 TNS1Q9HBL0 1735 aaKnown RBP29.5■■■□□ 2.31
HMCES-204ENST00000502878 SRGAP3O43295 1099 aa29.5■■■□□ 2.31
HMCES-204ENST00000502878 MTX1Q13505 466 aa29.49■■■□□ 2.31
HMCES-204ENST00000502878 ANKRD36CQ5JPF3 1778 aa29.49■■■□□ 2.31
HMCES-204ENST00000502878 POLA2Q14181 598 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms