RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PPP1R1BQ9UD71 204 aaPredicted RBP32.41■■■□□ 2.78
LSM6-202ENST00000502781 BCORQ6W2J9 1755 aa32.4■■■□□ 2.78
LSM6-202ENST00000502781 ERVV-1B6SEH8 477 aa32.4■■■□□ 2.78
LSM6-202ENST00000502781 NFIXQ14938 502 aa32.4■■■□□ 2.78
LSM6-202ENST00000502781 MAP3K15Q6ZN16 1313 aa32.39■■■□□ 2.78
LSM6-202ENST00000502781 DDR1Q08345 913 aa32.39■■■□□ 2.78
LSM6-202ENST00000502781 HYPKQ9NX55 129 aa32.39■■■□□ 2.78
LSM6-202ENST00000502781 COPS6Q7L5N1 327 aa32.37■■■□□ 2.77
LSM6-202ENST00000502781 XAGE3Q8WTP9 111 aa32.37■■■□□ 2.77
LSM6-202ENST00000502781 POLRMTO00411 1230 aaKnown RBP32.36■■■□□ 2.77
LSM6-202ENST00000502781 TBC1D9BQ66K14 1250 aa32.36■■■□□ 2.77
LSM6-202ENST00000502781 KIF6Q6ZMV9 814 aa32.36■■■□□ 2.77
LSM6-202ENST00000502781 HLFQ16534 295 aa32.35■■■□□ 2.77
LSM6-202ENST00000502781 ZNF652Q9Y2D9 606 aa32.35■■■□□ 2.77
LSM6-202ENST00000502781 PARP3Q9Y6F1 533 aa32.35■■■□□ 2.77
LSM6-202ENST00000502781 FHDC1Q9C0D6 1143 aaPredicted RBP32.34■■■□□ 2.77
LSM6-202ENST00000502781 ZBED9Q6R2W3 1325 aa32.34■■■□□ 2.77
LSM6-202ENST00000502781 ZBTB3Q9H5J0 574 aa32.32■■■□□ 2.77
LSM6-202ENST00000502781 GIGYF2Q6Y7W6 1299 aaKnown RBP32.32■■■□□ 2.76
LSM6-202ENST00000502781 AIMP1Q12904 312 aaKnown RBP32.31■■■□□ 2.76
LSM6-202ENST00000502781 BICDL1Q6ZP65 573 aa32.31■■■□□ 2.76
LSM6-202ENST00000502781 SYT17Q9BSW7 474 aa32.31■■■□□ 2.76
LSM6-202ENST00000502781 STK31Q9BXU1 1019 aa32.31■■■□□ 2.76
LSM6-202ENST00000502781 PHAXQ9H814 394 aaKnown RBP32.31■■■□□ 2.76
LSM6-202ENST00000502781 ATP10DQ9P241 1426 aa32.3■■■□□ 2.76
LSM6-202ENST00000502781 CD2APQ9Y5K6 639 aa32.3■■■□□ 2.76
LSM6-202ENST00000502781 CARMIL3Q8ND23 1372 aa32.29■■■□□ 2.76
LSM6-202ENST00000502781 TCERG1O14776 1098 aaKnown RBP32.28■■■□□ 2.76
LSM6-202ENST00000502781 SERPINB2P05120 415 aa32.28■■■□□ 2.76
LSM6-202ENST00000502781 PLBD2Q8NHP8 589 aa32.28■■■□□ 2.76
LSM6-202ENST00000502781 SETDB2Q96T68 719 aa32.28■■■□□ 2.76
LSM6-202ENST00000502781 C10orf71Q711Q0 1435 aa32.27■■■□□ 2.76
LSM6-202ENST00000502781 SLC4A2P04920 1241 aa32.27■■■□□ 2.76
LSM6-202ENST00000502781 ANKRD13DQ6ZTN6 518 aa32.27■■■□□ 2.76
LSM6-202ENST00000502781 NRXN2Q9P2S2 1712 aa32.26■■■□□ 2.75
LSM6-202ENST00000502781 NIP7Q9Y221 180 aaKnown RBP eCLIP32.26■■■□□ 2.75
LSM6-202ENST00000502781 ZNF34Q8IZ26 560 aa32.25■■■□□ 2.75
LSM6-202ENST00000502781 NUP98P52948 1817 aa32.25■■■□□ 2.75
LSM6-202ENST00000502781 ZNF428Q96B54 188 aa32.23■■■□□ 2.75
LSM6-202ENST00000502781 CT47B1P0C2W7 299 aaPredicted RBP32.22■■■□□ 2.75
LSM6-202ENST00000502781 G2E3Q7L622 706 aa32.22■■■□□ 2.75
LSM6-202ENST00000502781 HSP90AB3PQ58FF7 597 aa32.21■■■□□ 2.75
LSM6-202ENST00000502781 KLHL34Q8N239 644 aa32.21■■■□□ 2.75
LSM6-202ENST00000502781 UBN2Q6ZU65 1347 aa32.21■■■□□ 2.75
LSM6-202ENST00000502781 AFDNP55196 1824 aaKnown RBP32.21■■■□□ 2.75
LSM6-202ENST00000502781 KIF13BQ9NQT8 1826 aa32.21■■■□□ 2.75
LSM6-202ENST00000502781 TCIRG1Q13488 830 aa32.2■■■□□ 2.75
LSM6-202ENST00000502781 PRR5LQ6MZQ0 368 aa32.19■■■□□ 2.74
LSM6-202ENST00000502781 NLGN2Q8NFZ4 835 aa32.19■■■□□ 2.74
LSM6-202ENST00000502781 CACNA1FO60840 1977 aa32.19■■■□□ 2.74
LSM6-202ENST00000502781 FLIIQ13045 1269 aa32.19■■■□□ 2.74
LSM6-202ENST00000502781 DDX58O95786 925 aaKnown RBP32.18■■■□□ 2.74
LSM6-202ENST00000502781 GPTP24298 496 aa32.18■■■□□ 2.74
LSM6-202ENST00000502781 IBTKQ9P2D0 1353 aaPredicted RBP32.18■■■□□ 2.74
LSM6-202ENST00000502781 PARP10Q53GL7 1025 aa32.17■■■□□ 2.74
LSM6-202ENST00000502781 NBPF5PQ86XG9 351 aaPredicted RBP32.17■■■□□ 2.74
LSM6-202ENST00000502781 CNBD1Q8NA66 436 aa32.17■■■□□ 2.74
LSM6-202ENST00000502781 TGFB2P61812 414 aa32.16■■■□□ 2.74
LSM6-202ENST00000502781 KSR2Q6VAB6 950 aa32.16■■■□□ 2.74
LSM6-202ENST00000502781 RIC3Q7Z5B4 369 aa32.16■■■□□ 2.74
LSM6-202ENST00000502781 ISCA1Q9BUE6 129 aa32.16■■■□□ 2.74
LSM6-202ENST00000502781 ADCY9O60503 1353 aa32.15■■■□□ 2.74
LSM6-202ENST00000502781 TPTE2Q6XPS3 522 aa32.15■■■□□ 2.74
LSM6-202ENST00000502781 SSH1Q8WYL5 1049 aa32.15■■■□□ 2.74
LSM6-202ENST00000502781 PI4KAP2A4QPH2 592 aa32.14■■■□□ 2.74
LSM6-202ENST00000502781 ALDH1L2Q3SY69 923 aa32.14■■■□□ 2.74
LSM6-202ENST00000502781 SUSD4Q5VX71 490 aa32.14■■■□□ 2.74
LSM6-202ENST00000502781 PI4KAP1Q8N8J0 262 aa32.14■■■□□ 2.74
LSM6-202ENST00000502781 PXDNLA1KZ92 1463 aa32.13■■■□□ 2.73
LSM6-202ENST00000502781 ARFGEF2Q9Y6D5 1785 aa32.13■■■□□ 2.73
LSM6-202ENST00000502781 TRIM28Q13263 835 aaKnown RBP32.13■■■□□ 2.73
LSM6-202ENST00000502781 NLRP10Q86W26 655 aa32.13■■■□□ 2.73
LSM6-202ENST00000502781 MRPL50Q8N5N7 158 aaKnown RBP32.13■■■□□ 2.73
LSM6-202ENST00000502781 ANKRD36CQ5JPF3 1778 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 NTSR2O95665 410 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 METTL22Q9BUU2 404 aaPredicted RBP32.12■■■□□ 2.73
LSM6-202ENST00000502781 BRIP1Q9BX63 1249 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 NYXQ9GZU5 481 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 MAP3K2Q9Y2U5 619 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 KIAA1551Q9HCM1 1747 aa32.12■■■□□ 2.73
LSM6-202ENST00000502781 FKBP5Q13451 457 aaPredicted RBP32.1■■■□□ 2.73
LSM6-202ENST00000502781 PPP1R42Q7Z4L9 355 aa32.1■■■□□ 2.73
LSM6-202ENST00000502781 FAM177BA6PVY3 158 aa32.09■■■□□ 2.73
LSM6-202ENST00000502781 ST5P78524 1137 aa32.09■■■□□ 2.73
LSM6-202ENST00000502781 CCDC24Q8N4L8 307 aa32.09■■■□□ 2.73
LSM6-202ENST00000502781 RNF123Q5XPI4 1314 aa32.08■■■□□ 2.73
LSM6-202ENST00000502781 ATP5J2-PTCD1G3V325 749 aa32.07■■■□□ 2.73
LSM6-202ENST00000502781 BRPF1P55201 1214 aaPredicted RBP32.07■■■□□ 2.73
LSM6-202ENST00000502781 MYD88Q99836 296 aa32.07■■■□□ 2.73
LSM6-202ENST00000502781 UTP14AQ9BVJ6 771 aaKnown RBP32.07■■■□□ 2.73
LSM6-202ENST00000502781 NPHP1O15259 732 aa32.07■■■□□ 2.72
LSM6-202ENST00000502781 DPEP1P16444 411 aa32.07■■■□□ 2.72
LSM6-202ENST00000502781 KCNA3P22001 575 aa32.07■■■□□ 2.72
LSM6-202ENST00000502781 RARSP54136 660 aaKnown RBP32.07■■■□□ 2.72
LSM6-202ENST00000502781 RIC1Q4ADV7 1423 aa32.06■■■□□ 2.72
LSM6-202ENST00000502781 A0A0G2JLW4 131 aa32.06■■■□□ 2.72
LSM6-202ENST00000502781 NUTM1Q86Y26 1132 aa32.06■■■□□ 2.72
LSM6-202ENST00000502781 DNAAF4Q8WXU2 420 aa32.06■■■□□ 2.72
LSM6-202ENST00000502781 ABCC12Q96J65 1359 aa32.05■■■□□ 2.72
LSM6-202ENST00000502781 ANKRD31Q8N7Z5 1873 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms