RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 TWISTNBQ3B726 338 aaPredicted RBP15.81■□□□□ 0.12
YIPF3-209ENST00000500090 TBC1D9BQ66K14 1250 aa15.81■□□□□ 0.12
YIPF3-209ENST00000500090 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
YIPF3-209ENST00000500090 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 E9PSI1 815 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 SERPINB2P05120 415 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 BICDL1Q6ZP65 573 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 TSPYL6Q8N831 410 aa15.8■□□□□ 0.12
YIPF3-209ENST00000500090 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
YIPF3-209ENST00000500090 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
YIPF3-209ENST00000500090 CARMIL3Q8ND23 1372 aa15.79■□□□□ 0.12
YIPF3-209ENST00000500090 ANXA1P04083 346 aa15.79■□□□□ 0.12
YIPF3-209ENST00000500090 TGFB2P61812 414 aa15.79■□□□□ 0.12
YIPF3-209ENST00000500090 BCORQ6W2J9 1755 aa15.78■□□□□ 0.12
YIPF3-209ENST00000500090 HLFQ16534 295 aa15.78■□□□□ 0.12
YIPF3-209ENST00000500090 GIGYF2Q6Y7W6 1299 aaKnown RBP15.78■□□□□ 0.12
YIPF3-209ENST00000500090 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
YIPF3-209ENST00000500090 GOLGB1Q14789 3259 aaKnown RBP15.77■□□□□ 0.12
YIPF3-209ENST00000500090 EXOSC9Q06265 439 aaKnown RBP15.77■□□□□ 0.12
YIPF3-209ENST00000500090 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
YIPF3-209ENST00000500090 STK31Q9BXU1 1019 aa15.77■□□□□ 0.12
YIPF3-209ENST00000500090 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
YIPF3-209ENST00000500090 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
YIPF3-209ENST00000500090 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.11
YIPF3-209ENST00000500090 VAMP4O75379 141 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 SLFN5Q08AF3 891 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 HSP90AB3PQ58FF7 597 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 ANKRD13DQ6ZTN6 518 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
YIPF3-209ENST00000500090 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
YIPF3-209ENST00000500090 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
YIPF3-209ENST00000500090 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
YIPF3-209ENST00000500090 NUP98P52948 1817 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 NPHP1O15259 732 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 DDX58O95786 925 aaKnown RBP15.74■□□□□ 0.11
YIPF3-209ENST00000500090 PARP10Q53GL7 1025 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 PDZRN3Q9UPQ7 1066 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
YIPF3-209ENST00000500090 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
YIPF3-209ENST00000500090 ST5P78524 1137 aa15.73■□□□□ 0.11
YIPF3-209ENST00000500090 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
YIPF3-209ENST00000500090 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
YIPF3-209ENST00000500090 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
YIPF3-209ENST00000500090 TRMT2AQ8IZ69 625 aaKnown RBP15.73■□□□□ 0.11
YIPF3-209ENST00000500090 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
YIPF3-209ENST00000500090 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
YIPF3-209ENST00000500090 UTRNP46939 3433 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 PDE6BP35913 854 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 PPP1R42Q7Z4L9 355 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 CDCA7LQ96GN5 454 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
YIPF3-209ENST00000500090 CACNA1FO60840 1977 aa15.72■□□□□ 0.11
YIPF3-209ENST00000500090 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
YIPF3-209ENST00000500090 DPEP1P16444 411 aa15.71■□□□□ 0.11
YIPF3-209ENST00000500090 GPTP24298 496 aa15.71■□□□□ 0.11
YIPF3-209ENST00000500090 GTF2E1P29083 439 aaPredicted RBP15.71■□□□□ 0.11
YIPF3-209ENST00000500090 GPR162Q16538 588 aa15.71■□□□□ 0.11
YIPF3-209ENST00000500090 ZNF428Q96B54 188 aa15.71■□□□□ 0.11
YIPF3-209ENST00000500090 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
YIPF3-209ENST00000500090 H0YIN7 160 aa15.7■□□□□ 0.1
YIPF3-209ENST00000500090 CT47B1P0C2W7 299 aaPredicted RBP15.7■□□□□ 0.1
YIPF3-209ENST00000500090 PXDNLA1KZ92 1463 aa15.7■□□□□ 0.1
YIPF3-209ENST00000500090 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
YIPF3-209ENST00000500090 UBN2Q6ZU65 1347 aa15.69■□□□□ 0.1
YIPF3-209ENST00000500090 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
YIPF3-209ENST00000500090 GRIN3BO60391 1043 aa15.69■□□□□ 0.1
YIPF3-209ENST00000500090 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
YIPF3-209ENST00000500090 SUSD4Q5VX71 490 aa15.69■□□□□ 0.1
YIPF3-209ENST00000500090 PIM2Q9P1W9 311 aa15.69■□□□□ 0.1
YIPF3-209ENST00000500090 FAM177BA6PVY3 158 aa15.68■□□□□ 0.1
YIPF3-209ENST00000500090 KCNA3P22001 575 aa15.68■□□□□ 0.1
YIPF3-209ENST00000500090 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
YIPF3-209ENST00000500090 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
YIPF3-209ENST00000500090 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
YIPF3-209ENST00000500090 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
YIPF3-209ENST00000500090 CHRNA5P30532 468 aa15.67■□□□□ 0.1
YIPF3-209ENST00000500090 FLIIQ13045 1269 aa15.67■□□□□ 0.1
YIPF3-209ENST00000500090 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
YIPF3-209ENST00000500090 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
YIPF3-209ENST00000500090 METTL22Q9BUU2 404 aaPredicted RBP15.67■□□□□ 0.1
YIPF3-209ENST00000500090 ZBED9Q6R2W3 1325 aa15.67■□□□□ 0.1
YIPF3-209ENST00000500090 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
YIPF3-209ENST00000500090 PI4KAP2A4QPH2 592 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 NTSR2O95665 410 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 DALRD3Q5D0E6 543 aaKnown RBP15.66■□□□□ 0.1
YIPF3-209ENST00000500090 G2E3Q7L622 706 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 PI4KAP1Q8N8J0 262 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 MAP3K2Q9Y2U5 619 aa15.66■□□□□ 0.1
YIPF3-209ENST00000500090 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
YIPF3-209ENST00000500090 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.14e-8■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms