RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 PRR20EP86478 221 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PRR20CP86479 221 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PRR20DP86480 221 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PRR20BP86481 221 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PRR20AP86496 221 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PKD2L1Q9P0L9 805 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 AHDC1Q5TGY3 1603 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 FAM135BQ49AJ0 1406 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 GDF9O60383 454 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 GPR37L1O60883 481 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 MPHOSPH9Q99550 1183 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
TMEM39A-212ENST00000497993 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 TMEM94Q12767 1356 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 RFX1P22670 979 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 FOXC1Q12948 553 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 ZBTB33Q86T24 672 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 MPNDQ8N594 471 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 FAM174AQ8TBP5 190 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 MRGPRX2Q96LB1 330 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 IGSF5Q9NSI5 407 aa8.4□□□□□ -1.06
TMEM39A-212ENST00000497993 SHPRHQ149N8 1683 aa8.4□□□□□ -1.07
TMEM39A-212ENST00000497993 COL16A1Q07092 1604 aaPredicted RBP8.4□□□□□ -1.07
TMEM39A-212ENST00000497993 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 NR1H3Q13133 447 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 WASHC4Q2M389 1173 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 C1QTNF2Q9BXJ5 285 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 DLC1Q96QB1 1528 aa8.39□□□□□ -1.07
TMEM39A-212ENST00000497993 ADGRL3Q9HAR2 1447 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 PHLPP1O60346 1717 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 SIAH2O43255 324 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 TOM1O60784 492 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 ERCC3P19447 782 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 ADGRB1O14514 1584 aa8.38□□□□□ -1.07
TMEM39A-212ENST00000497993 FMN2Q9NZ56 1722 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 METP08581 1390 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 FBXO45P0C2W1 286 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 CDV3Q9UKY7 258 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 ARHGEF28Q8N1W1 1705 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-212ENST00000497993 MED1Q15648 1581 aaPredicted RBP8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 CYP4X1Q8N118 509 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 ADAM32Q8TC27 787 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 CARD14Q9BXL6 1004 aa8.36□□□□□ -1.07
TMEM39A-212ENST00000497993 MSH6P52701 1360 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 CHMP4AQ9BY43 222 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 PPP1R12CQ9BZL4 782 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
TMEM39A-212ENST00000497993 KIF1AQ12756 1690 aa8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 TTC24A2A3L6 582 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 RGPD8O14715 1765 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 MST1RQ04912 1400 aa8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 ABCC11Q96J66 1382 aa8.34□□□□□ -1.07
TMEM39A-212ENST00000497993 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 GFRA3O60609 400 aa8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 SOX11P35716 441 aa8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 SLC10A4Q96EP9 437 aa8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 LRPPRCP42704 1394 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-212ENST00000497993 COL22A1Q8NFW1 1626 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 MARF1Q9Y4F3 1742 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 ATG7O95352 703 aa8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 CCER1Q8TC90 406 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 MRRFQ96E11 262 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms