RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 C4BP0C0L5 1744 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 EIF5P55010 431 aaKnown RBP20.22■□□□□ 0.83
PTK7-220ENST00000497957 TXNRD1Q16881 649 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 CNTNAP4Q9C0A0 1308 aa20.22■□□□□ 0.83
PTK7-220ENST00000497957 HLFQ16534 295 aa20.21■□□□□ 0.83
PTK7-220ENST00000497957 ERICH6BQ5W0A0 696 aa20.21■□□□□ 0.83
PTK7-220ENST00000497957 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
PTK7-220ENST00000497957 ARXQ96QS3 562 aa20.21■□□□□ 0.83
PTK7-220ENST00000497957 DDX19BQ9UMR2 479 aa20.21■□□□□ 0.83
PTK7-220ENST00000497957 ATP5J2-PTCD1G3V325 749 aa20.2■□□□□ 0.82
PTK7-220ENST00000497957 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
PTK7-220ENST00000497957 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
PTK7-220ENST00000497957 CCT4P50991 539 aaKnown RBP20.2■□□□□ 0.82
PTK7-220ENST00000497957 METTL22Q9BUU2 404 aaPredicted RBP20.2■□□□□ 0.82
PTK7-220ENST00000497957 ZBTB40Q9NUA8 1239 aa20.2■□□□□ 0.82
PTK7-220ENST00000497957 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
PTK7-220ENST00000497957 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
PTK7-220ENST00000497957 SRCIN1Q9C0H9 1055 aa20.19■□□□□ 0.82
PTK7-220ENST00000497957 GNPATO15228 680 aa20.18■□□□□ 0.82
PTK7-220ENST00000497957 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
PTK7-220ENST00000497957 MAP3K15Q6ZN16 1313 aa20.18■□□□□ 0.82
PTK7-220ENST00000497957 COL15A1P39059 1388 aa20.18■□□□□ 0.82
PTK7-220ENST00000497957 EP400Q96L91 3159 aa20.18■□□□□ 0.82
PTK7-220ENST00000497957 PLSCR1O15162 318 aa20.17■□□□□ 0.82
PTK7-220ENST00000497957 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
PTK7-220ENST00000497957 EZH2Q15910 746 aaKnown RBP20.17■□□□□ 0.82
PTK7-220ENST00000497957 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
PTK7-220ENST00000497957 USP44Q9H0E7 712 aa20.17■□□□□ 0.82
PTK7-220ENST00000497957 AFDNP55196 1824 aaKnown RBP20.16■□□□□ 0.82
PTK7-220ENST00000497957 NEURL1BA8MQ27 555 aa20.16■□□□□ 0.82
PTK7-220ENST00000497957 RPS6KA4O75676 772 aa20.16■□□□□ 0.82
PTK7-220ENST00000497957 ZNF827Q17R98 1081 aa20.16■□□□□ 0.82
PTK7-220ENST00000497957 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
PTK7-220ENST00000497957 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
PTK7-220ENST00000497957 PHF14O94880 888 aa20.15■□□□□ 0.82
PTK7-220ENST00000497957 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
PTK7-220ENST00000497957 IGHDP01880 384 aa20.15■□□□□ 0.82
PTK7-220ENST00000497957 SLC27A3Q5K4L6 730 aa20.15■□□□□ 0.82
PTK7-220ENST00000497957 LINS1Q8NG48 757 aa20.15■□□□□ 0.82
PTK7-220ENST00000497957 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
PTK7-220ENST00000497957 NBPF7P0C2Y1 421 aaPredicted RBP20.14■□□□□ 0.81
PTK7-220ENST00000497957 CCDC136Q96JN2 1154 aa20.14■□□□□ 0.81
PTK7-220ENST00000497957 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
PTK7-220ENST00000497957 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 AK7Q96M32 723 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 NUP98P52948 1817 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
PTK7-220ENST00000497957 TUBGCP6Q96RT7 1819 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 GPTP24298 496 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
PTK7-220ENST00000497957 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
PTK7-220ENST00000497957 BCL2L12Q9HB09 334 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 RGPD3A6NKT7 1758 aaPredicted RBP20.12■□□□□ 0.81
PTK7-220ENST00000497957 RGPD4Q7Z3J3 1758 aa20.12■□□□□ 0.81
PTK7-220ENST00000497957 GCKRQ14397 625 aa20.11■□□□□ 0.81
PTK7-220ENST00000497957 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
PTK7-220ENST00000497957 LRRFIP2Q9Y608 721 aaKnown RBP20.11■□□□□ 0.81
PTK7-220ENST00000497957 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
PTK7-220ENST00000497957 SCN7AQ01118 1682 aa20.1■□□□□ 0.81
PTK7-220ENST00000497957 NEXNQ0ZGT2 675 aa20.1■□□□□ 0.81
PTK7-220ENST00000497957 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
PTK7-220ENST00000497957 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
PTK7-220ENST00000497957 ANO8Q9HCE9 1232 aaPredicted RBP20.1■□□□□ 0.81
PTK7-220ENST00000497957 UBN2Q6ZU65 1347 aa20.09■□□□□ 0.81
PTK7-220ENST00000497957 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
PTK7-220ENST00000497957 USPL1Q5W0Q7 1092 aa20.09■□□□□ 0.81
PTK7-220ENST00000497957 SUCLG2Q96I99 432 aa20.09■□□□□ 0.81
PTK7-220ENST00000497957 GRM8O00222 908 aa20.08■□□□□ 0.81
PTK7-220ENST00000497957 CASP7P55210 303 aa20.08■□□□□ 0.81
PTK7-220ENST00000497957 SKAP1Q86WV1 359 aa20.08■□□□□ 0.81
PTK7-220ENST00000497957 SYNE4Q8N205 404 aa20.08■□□□□ 0.81
PTK7-220ENST00000497957 KAZALD1Q96I82 304 aa20.08■□□□□ 0.81
PTK7-220ENST00000497957 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
PTK7-220ENST00000497957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
PTK7-220ENST00000497957 GNAI3P08754 354 aa20.07■□□□□ 0.8
PTK7-220ENST00000497957 UBTFL1P0CB47 393 aaPredicted RBP20.07■□□□□ 0.8
PTK7-220ENST00000497957 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
PTK7-220ENST00000497957 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
PTK7-220ENST00000497957 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
PTK7-220ENST00000497957 ZNF34Q8IZ26 560 aa20.07■□□□□ 0.8
PTK7-220ENST00000497957 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
PTK7-220ENST00000497957 UTYO14607 1347 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 A0A087WZG4 1122 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 GNAI2P04899 355 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 UBE3BQ7Z3V4 1068 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 NLRP10Q86W26 655 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
PTK7-220ENST00000497957 NARFQ9UHQ1 456 aa20.06■□□□□ 0.8
PTK7-220ENST00000497957 H7C1W4 665 aa20.05■□□□□ 0.8
PTK7-220ENST00000497957 TRAPPC3LQ5T215 181 aa20.05■□□□□ 0.8
PTK7-220ENST00000497957 TBC1D9BQ66K14 1250 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms