RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GNAI3P08754 354 aa25.89■■□□□ 1.74
KPNA1-210ENST00000494339 CRKLP46109 303 aaKnown RBP25.89■■□□□ 1.74
KPNA1-210ENST00000494339 NEXNQ0ZGT2 675 aa25.89■■□□□ 1.74
KPNA1-210ENST00000494339 LINS1Q8NG48 757 aa25.89■■□□□ 1.74
KPNA1-210ENST00000494339 ZBTB3Q9H5J0 574 aa25.89■■□□□ 1.74
KPNA1-210ENST00000494339 ZNF831Q5JPB2 1677 aa25.89■■□□□ 1.73
KPNA1-210ENST00000494339 MYH14Q7Z406 1995 aaKnown RBP25.89■■□□□ 1.73
KPNA1-210ENST00000494339 ARXQ96QS3 562 aa25.88■■□□□ 1.73
KPNA1-210ENST00000494339 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
KPNA1-210ENST00000494339 COL5A3P25940 1745 aaPredicted RBP25.88■■□□□ 1.73
KPNA1-210ENST00000494339 NUP188Q5SRE5 1749 aa25.88■■□□□ 1.73
KPNA1-210ENST00000494339 ALDH1L1O75891 902 aa25.88■■□□□ 1.73
KPNA1-210ENST00000494339 TRIM37O94972 964 aa25.88■■□□□ 1.73
KPNA1-210ENST00000494339 HDAC1Q13547 482 aaPredicted RBP25.88■■□□□ 1.73
KPNA1-210ENST00000494339 INTS5Q6P9B9 1019 aaKnown RBP25.88■■□□□ 1.73
KPNA1-210ENST00000494339 IGKV5-2P06315 115 aa25.87■■□□□ 1.73
KPNA1-210ENST00000494339 UBTFL1P0CB47 393 aaPredicted RBP25.86■■□□□ 1.73
KPNA1-210ENST00000494339 GNAI2P04899 355 aa25.86■■□□□ 1.73
KPNA1-210ENST00000494339 SIRT2Q8IXJ6 389 aa25.86■■□□□ 1.73
KPNA1-210ENST00000494339 LINC00116Q8NCU8 138 aa25.86■■□□□ 1.73
KPNA1-210ENST00000494339 LY75O60449 1722 aa25.85■■□□□ 1.73
KPNA1-210ENST00000494339 NBPF7P0C2Y1 421 aaPredicted RBP25.85■■□□□ 1.73
KPNA1-210ENST00000494339 IL6STP40189 918 aaPredicted RBP25.85■■□□□ 1.73
KPNA1-210ENST00000494339 KIF6Q6ZMV9 814 aa25.85■■□□□ 1.73
KPNA1-210ENST00000494339 CCNL1Q9UK58 526 aaPredicted RBP25.85■■□□□ 1.73
KPNA1-210ENST00000494339 AFDNP55196 1824 aaKnown RBP25.85■■□□□ 1.73
KPNA1-210ENST00000494339 NEURL1BA8MQ27 555 aa25.84■■□□□ 1.73
KPNA1-210ENST00000494339 NPM2Q86SE8 214 aaKnown RBP25.84■■□□□ 1.73
KPNA1-210ENST00000494339 C9orf78Q9NZ63 289 aaPredicted RBP25.84■■□□□ 1.73
KPNA1-210ENST00000494339 ATP5J2-PTCD1G3V325 749 aa25.84■■□□□ 1.73
KPNA1-210ENST00000494339 CEP85Q6P2H3 762 aa25.84■■□□□ 1.73
KPNA1-210ENST00000494339 RREB1Q92766 1687 aa25.83■■□□□ 1.73
KPNA1-210ENST00000494339 LRRFIP2Q9Y608 721 aaKnown RBP25.83■■□□□ 1.73
KPNA1-210ENST00000494339 SKAP1Q86WV1 359 aa25.82■■□□□ 1.72
KPNA1-210ENST00000494339 RPAP2Q8IXW5 612 aaPredicted RBP25.82■■□□□ 1.72
KPNA1-210ENST00000494339 ANKRD44Q8N8A2 993 aa25.82■■□□□ 1.72
KPNA1-210ENST00000494339 EIF5P55010 431 aaKnown RBP25.81■■□□□ 1.72
KPNA1-210ENST00000494339 MAP3K15Q6ZN16 1313 aa25.81■■□□□ 1.72
KPNA1-210ENST00000494339 GRM8O00222 908 aa25.8■■□□□ 1.72
KPNA1-210ENST00000494339 GCKRQ14397 625 aa25.8■■□□□ 1.72
KPNA1-210ENST00000494339 TBC1D2BQ9UPU7 963 aa25.8■■□□□ 1.72
KPNA1-210ENST00000494339 DZIP3Q86Y13 1208 aaKnown RBP25.8■■□□□ 1.72
KPNA1-210ENST00000494339 TAF1LQ8IZX4 1826 aa25.79■■□□□ 1.72
KPNA1-210ENST00000494339 TSHZ2Q9NRE2 1034 aa25.78■■□□□ 1.72
KPNA1-210ENST00000494339 CNTNAP4Q9C0A0 1308 aa25.77■■□□□ 1.72
KPNA1-210ENST00000494339 HLFQ16534 295 aa25.76■■□□□ 1.72
KPNA1-210ENST00000494339 UTYO14607 1347 aa25.76■■□□□ 1.71
KPNA1-210ENST00000494339 TCIRG1Q13488 830 aa25.76■■□□□ 1.71
KPNA1-210ENST00000494339 SMC5Q8IY18 1101 aa25.76■■□□□ 1.71
KPNA1-210ENST00000494339 COL15A1P39059 1388 aa25.75■■□□□ 1.71
KPNA1-210ENST00000494339 IBTKQ9P2D0 1353 aaPredicted RBP25.75■■□□□ 1.71
KPNA1-210ENST00000494339 GIGYF2Q6Y7W6 1299 aaKnown RBP25.75■■□□□ 1.71
KPNA1-210ENST00000494339 JARID2Q92833 1246 aaPredicted RBP25.75■■□□□ 1.71
KPNA1-210ENST00000494339 NUP98P52948 1817 aa25.75■■□□□ 1.71
KPNA1-210ENST00000494339 LRRC4BQ9NT99 713 aa25.75■■□□□ 1.71
KPNA1-210ENST00000494339 A0A087WZG4 1122 aa25.74■■□□□ 1.71
KPNA1-210ENST00000494339 PNMA6EA0A0J9YXQ4 647 aa25.74■■□□□ 1.71
KPNA1-210ENST00000494339 CWC25Q9NXE8 425 aaPredicted RBP25.74■■□□□ 1.71
KPNA1-210ENST00000494339 HMMRO75330 724 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 ATP8B2P98198 1209 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 RC3H1Q5TC82 1133 aaKnown RBP25.73■■□□□ 1.71
KPNA1-210ENST00000494339 UBE3BQ7Z3V4 1068 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 ISCA1Q9BUE6 129 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 PDZRN3Q9UPQ7 1066 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 ERVV-1B6SEH8 477 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 CCDC191Q8NCU4 936 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 SUCLG2Q96I99 432 aa25.73■■□□□ 1.71
KPNA1-210ENST00000494339 GNPATO15228 680 aa25.72■■□□□ 1.71
KPNA1-210ENST00000494339 SMIM5Q71RC9 77 aa25.72■■□□□ 1.71
KPNA1-210ENST00000494339 GCC1Q96CN9 775 aa25.72■■□□□ 1.71
KPNA1-210ENST00000494339 HDAC5Q9UQL6 1122 aa25.72■■□□□ 1.71
KPNA1-210ENST00000494339 C4BP0C0L5 1744 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 ANKRD36CQ5JPF3 1778 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 GPTP24298 496 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 HSP90AB3PQ58FF7 597 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 RTL5Q5HYW3 569 aaPredicted RBP25.71■■□□□ 1.71
KPNA1-210ENST00000494339 KAZALD1Q96I82 304 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 DCTPP1Q9H773 170 aa25.71■■□□□ 1.71
KPNA1-210ENST00000494339 APBA3O96018 575 aa25.7■■□□□ 1.7
KPNA1-210ENST00000494339 PPP1R42Q7Z4L9 355 aa25.7■■□□□ 1.7
KPNA1-210ENST00000494339 RPS6KA4O75676 772 aa25.69■■□□□ 1.7
KPNA1-210ENST00000494339 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
KPNA1-210ENST00000494339 RGS3P49796 1198 aa25.69■■□□□ 1.7
KPNA1-210ENST00000494339 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
KPNA1-210ENST00000494339 BICC1Q9H694 974 aaKnown RBP25.69■■□□□ 1.7
KPNA1-210ENST00000494339 SRGAP3O43295 1099 aa25.68■■□□□ 1.7
KPNA1-210ENST00000494339 TRIM28Q13263 835 aaKnown RBP25.68■■□□□ 1.7
KPNA1-210ENST00000494339 H7C1W4 665 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 CASP7P55210 303 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 TXNRD1Q16881 649 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 RTCBQ9Y3I0 505 aaKnown RBP25.67■■□□□ 1.7
KPNA1-210ENST00000494339 ANKRD45Q5TZF3 282 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 AMIGO3Q86WK7 504 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 SSH3Q8TE77 659 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 AK7Q96M32 723 aa25.67■■□□□ 1.7
KPNA1-210ENST00000494339 NUCB1Q02818 461 aa25.66■■□□□ 1.7
KPNA1-210ENST00000494339 PROM2Q8N271 834 aa25.66■■□□□ 1.7
KPNA1-210ENST00000494339 BCORQ6W2J9 1755 aa25.65■■□□□ 1.7
KPNA1-210ENST00000494339 TNS1Q9HBL0 1735 aaKnown RBP25.65■■□□□ 1.7
KPNA1-210ENST00000494339 EPHA10Q5JZY3 1008 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms