RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 FLIIQ13045 1269 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 G2E3Q7L622 706 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 MRPL50Q8N5N7 158 aaKnown RBP18.6■□□□□ 0.57
BRCA1-223ENST00000494123 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 MAP3K15Q6ZN16 1313 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 FKBP5Q13451 457 aaPredicted RBP18.6■□□□□ 0.57
BRCA1-223ENST00000494123 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
BRCA1-223ENST00000494123 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
BRCA1-223ENST00000494123 ANKRD13DQ6ZTN6 518 aa18.59■□□□□ 0.57
BRCA1-223ENST00000494123 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
BRCA1-223ENST00000494123 GYS1P13807 737 aa18.58■□□□□ 0.56
BRCA1-223ENST00000494123 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
BRCA1-223ENST00000494123 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.56
BRCA1-223ENST00000494123 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
BRCA1-223ENST00000494123 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
BRCA1-223ENST00000494123 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
BRCA1-223ENST00000494123 NUP98P52948 1817 aa18.57■□□□□ 0.56
BRCA1-223ENST00000494123 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
BRCA1-223ENST00000494123 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 BCAR3O75815 825 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 NLGN1Q8N2Q7 840 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 FKBP8Q14318 412 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 HLFQ16534 295 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 MTFR1LQ9H019 292 aa18.56■□□□□ 0.56
BRCA1-223ENST00000494123 PTPRCP08575 1304 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 RGL2O15211 777 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
BRCA1-223ENST00000494123 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
BRCA1-223ENST00000494123 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
BRCA1-223ENST00000494123 HSP90AB3PQ58FF7 597 aa18.54■□□□□ 0.56
BRCA1-223ENST00000494123 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
BRCA1-223ENST00000494123 FRAT1Q92837 279 aaPredicted RBP18.54■□□□□ 0.56
BRCA1-223ENST00000494123 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
BRCA1-223ENST00000494123 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
BRCA1-223ENST00000494123 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
BRCA1-223ENST00000494123 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
BRCA1-223ENST00000494123 ADCY9O60503 1353 aa18.53■□□□□ 0.56
BRCA1-223ENST00000494123 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.56
BRCA1-223ENST00000494123 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
BRCA1-223ENST00000494123 NIP7Q9Y221 180 aaKnown RBP eCLIP18.52■□□□□ 0.56
BRCA1-223ENST00000494123 NEXNQ0ZGT2 675 aa18.52■□□□□ 0.55
BRCA1-223ENST00000494123 DNAAF4Q8WXU2 420 aa18.52■□□□□ 0.55
BRCA1-223ENST00000494123 SETDB2Q96T68 719 aa18.52■□□□□ 0.55
BRCA1-223ENST00000494123 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 F6X3S4 739 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 GPTP24298 496 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 POLD1P28340 1107 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 TCIRG1Q13488 830 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 MYD88Q99836 296 aa18.51■□□□□ 0.55
BRCA1-223ENST00000494123 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
BRCA1-223ENST00000494123 API5Q9BZZ5 524 aaKnown RBP18.51■□□□□ 0.55
BRCA1-223ENST00000494123 MMP10P09238 476 aa18.5■□□□□ 0.55
BRCA1-223ENST00000494123 NFIXQ14938 502 aa18.5■□□□□ 0.55
BRCA1-223ENST00000494123 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
BRCA1-223ENST00000494123 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 TM4SF1P30408 202 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 ZNF34Q8IZ26 560 aa18.49■□□□□ 0.55
BRCA1-223ENST00000494123 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
BRCA1-223ENST00000494123 NPHP1O15259 732 aa18.48■□□□□ 0.55
BRCA1-223ENST00000494123 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
BRCA1-223ENST00000494123 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
BRCA1-223ENST00000494123 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
BRCA1-223ENST00000494123 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
BRCA1-223ENST00000494123 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
BRCA1-223ENST00000494123 DDR1Q08345 913 aa18.46■□□□□ 0.55
BRCA1-223ENST00000494123 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
BRCA1-223ENST00000494123 NBPF5PQ86XG9 351 aaPredicted RBP18.46■□□□□ 0.55
BRCA1-223ENST00000494123 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
BRCA1-223ENST00000494123 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
BRCA1-223ENST00000494123 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 SERPINB2P05120 415 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 TRIM27P14373 513 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 NLRP10Q86W26 655 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 LINS1Q8NG48 757 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
BRCA1-223ENST00000494123 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
BRCA1-223ENST00000494123 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
BRCA1-223ENST00000494123 CWC25Q9NXE8 425 aaPredicted RBP18.45■□□□□ 0.54
BRCA1-223ENST00000494123 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
BRCA1-223ENST00000494123 TRIM28Q13263 835 aaKnown RBP18.44■□□□□ 0.54
BRCA1-223ENST00000494123 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
BRCA1-223ENST00000494123 BEND3Q5T5X7 828 aa18.44■□□□□ 0.54
BRCA1-223ENST00000494123 SUSD4Q5VX71 490 aa18.44■□□□□ 0.54
BRCA1-223ENST00000494123 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
BRCA1-223ENST00000494123 NEURL1BA8MQ27 555 aa18.43■□□□□ 0.54
BRCA1-223ENST00000494123 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms