RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
HSPG2-212ENST00000493940 PRELPP51888 382 aa16.61■□□□□ 0.25
HSPG2-212ENST00000493940 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
HSPG2-212ENST00000493940 PDIA6Q15084 440 aa16.61■□□□□ 0.25
HSPG2-212ENST00000493940 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
HSPG2-212ENST00000493940 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
HSPG2-212ENST00000493940 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
HSPG2-212ENST00000493940 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
HSPG2-212ENST00000493940 ANXA1P04083 346 aa16.6■□□□□ 0.25
HSPG2-212ENST00000493940 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
HSPG2-212ENST00000493940 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
HSPG2-212ENST00000493940 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
HSPG2-212ENST00000493940 CHL1O00533 1208 aa16.59■□□□□ 0.25
HSPG2-212ENST00000493940 KIF3CO14782 793 aa16.59■□□□□ 0.25
HSPG2-212ENST00000493940 MYL6BP14649 208 aa16.59■□□□□ 0.25
HSPG2-212ENST00000493940 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
HSPG2-212ENST00000493940 APAF1O14727 1248 aa16.58■□□□□ 0.24
HSPG2-212ENST00000493940 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
HSPG2-212ENST00000493940 TNRC6CQ9HCJ0 1690 aaKnown RBP16.58■□□□□ 0.24
HSPG2-212ENST00000493940 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.24
HSPG2-212ENST00000493940 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
HSPG2-212ENST00000493940 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
HSPG2-212ENST00000493940 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
HSPG2-212ENST00000493940 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
HSPG2-212ENST00000493940 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
HSPG2-212ENST00000493940 RASSF7Q02833 373 aa16.56■□□□□ 0.24
HSPG2-212ENST00000493940 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
HSPG2-212ENST00000493940 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
HSPG2-212ENST00000493940 H0YIN7 160 aa16.55■□□□□ 0.24
HSPG2-212ENST00000493940 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
HSPG2-212ENST00000493940 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
HSPG2-212ENST00000493940 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
HSPG2-212ENST00000493940 BABAM1Q9NWV8 329 aa16.55■□□□□ 0.24
HSPG2-212ENST00000493940 TAF1P21675 1872 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.24
HSPG2-212ENST00000493940 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-212ENST00000493940 LAMB2P55268 1798 aa16.54■□□□□ 0.24
HSPG2-212ENST00000493940 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
HSPG2-212ENST00000493940 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
HSPG2-212ENST00000493940 SRGNP10124 158 aa16.53■□□□□ 0.24
HSPG2-212ENST00000493940 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-212ENST00000493940 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 NFKBIEO00221 500 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 TOMM70O94826 608 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 GPTP24298 496 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 PDE6BP35913 854 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
HSPG2-212ENST00000493940 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 TIAM2Q8IVF5 1701 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-212ENST00000493940 RGL2O15211 777 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 C21orf2O43822 256 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 APLP1P51693 650 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 SLC51AQ86UW1 340 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
HSPG2-212ENST00000493940 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
HSPG2-212ENST00000493940 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
HSPG2-212ENST00000493940 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
HSPG2-212ENST00000493940 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
HSPG2-212ENST00000493940 ST5P78524 1137 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 TPTE2Q6XPS3 522 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
HSPG2-212ENST00000493940 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 NMRK2Q9NPI5 230 aa16.49■□□□□ 0.23
HSPG2-212ENST00000493940 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
HSPG2-212ENST00000493940 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 XAGE3Q8WTP9 111 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 ZNF428Q96B54 188 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 CHPF2Q9P2E5 772 aa16.48■□□□□ 0.23
HSPG2-212ENST00000493940 NPHP1O15259 732 aa16.47■□□□□ 0.23
HSPG2-212ENST00000493940 NTSR2O95665 410 aa16.47■□□□□ 0.23
HSPG2-212ENST00000493940 DUSP27Q5VZP5 1158 aa16.47■□□□□ 0.23
HSPG2-212ENST00000493940 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
HSPG2-212ENST00000493940 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
HSPG2-212ENST00000493940 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
HSPG2-212ENST00000493940 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.23
HSPG2-212ENST00000493940 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-212ENST00000493940 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.23
HSPG2-212ENST00000493940 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
HSPG2-212ENST00000493940 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
HSPG2-212ENST00000493940 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
HSPG2-212ENST00000493940 NPR1P16066 1061 aa16.44■□□□□ 0.22
HSPG2-212ENST00000493940 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
HSPG2-212ENST00000493940 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
HSPG2-212ENST00000493940 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
HSPG2-212ENST00000493940 ANP32CO43423 234 aa16.43■□□□□ 0.22
HSPG2-212ENST00000493940 LMNB1P20700 586 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms