RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CAMTA2O94983 1202 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 STARD3NLO95772 234 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 DEKP35659 375 aaKnown RBP10.77□□□□□ -0.69
HDAC6-234ENST00000493923 RASSF7Q02833 373 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
HDAC6-234ENST00000493923 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
HDAC6-234ENST00000493923 NBPF15Q8N660 670 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 PLEKHF1Q96S99 279 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
HDAC6-234ENST00000493923 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
HDAC6-234ENST00000493923 NMRK2Q9NPI5 230 aa10.76□□□□□ -0.69
HDAC6-234ENST00000493923 CCDC88AQ3V6T2 1871 aa10.76□□□□□ -0.69
HDAC6-234ENST00000493923 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
HDAC6-234ENST00000493923 IL6STP40189 918 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-234ENST00000493923 PRR5LQ6MZQ0 368 aa10.75□□□□□ -0.69
HDAC6-234ENST00000493923 C2CD5Q86YS7 1000 aa10.74□□□□□ -0.69
HDAC6-234ENST00000493923 SLX4Q8IY92 1834 aa10.74□□□□□ -0.69
HDAC6-234ENST00000493923 CACNA1SQ13698 1873 aa10.74□□□□□ -0.69
HDAC6-234ENST00000493923 A0A087WZG4 1122 aa10.73□□□□□ -0.69
HDAC6-234ENST00000493923 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
HDAC6-234ENST00000493923 TEX13AQ9BXU3 409 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-234ENST00000493923 RNF181Q9P0P0 153 aa10.73□□□□□ -0.69
HDAC6-234ENST00000493923 NFKBIEO00221 500 aa10.72□□□□□ -0.69
HDAC6-234ENST00000493923 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
HDAC6-234ENST00000493923 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
HDAC6-234ENST00000493923 TAF7Q15545 349 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-234ENST00000493923 NFE2L2Q16236 605 aa10.72□□□□□ -0.69
HDAC6-234ENST00000493923 HLFQ16534 295 aa10.72□□□□□ -0.69
HDAC6-234ENST00000493923 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
HDAC6-234ENST00000493923 LAMB4A4D0S4 1761 aa10.72□□□□□ -0.69
HDAC6-234ENST00000493923 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.69
HDAC6-234ENST00000493923 SLC51AQ86UW1 340 aa10.71□□□□□ -0.69
HDAC6-234ENST00000493923 TTLL6Q8N841 843 aa10.71□□□□□ -0.69
HDAC6-234ENST00000493923 FER1L6Q2WGJ9 1857 aa10.7□□□□□ -0.7
HDAC6-234ENST00000493923 HSPA6P17066 643 aa10.7□□□□□ -0.7
HDAC6-234ENST00000493923 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
HDAC6-234ENST00000493923 ZNF622Q969S3 477 aaKnown RBP eCLIP10.7□□□□□ -0.78e-10■□□□□ 9.8
HDAC6-234ENST00000493923 NUP98P52948 1817 aa10.7□□□□□ -0.7
HDAC6-234ENST00000493923 TNRC6CQ9HCJ0 1690 aaKnown RBP10.69□□□□□ -0.7
HDAC6-234ENST00000493923 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 H0YIN7 160 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 C21orf2O43822 256 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 TTLL7Q6ZT98 887 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 BRIP1Q9BX63 1249 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
HDAC6-234ENST00000493923 TIAM2Q8IVF5 1701 aa10.69□□□□□ -0.7
HDAC6-234ENST00000493923 HTRA3P83110 453 aa10.68□□□□□ -0.7
HDAC6-234ENST00000493923 CCDC146Q8IYE0 955 aa10.68□□□□□ -0.7
HDAC6-234ENST00000493923 CNBD1Q8NA66 436 aa10.68□□□□□ -0.7
HDAC6-234ENST00000493923 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
HDAC6-234ENST00000493923 DICER1Q9UPY3 1922 aaKnown RBP10.68□□□□□ -0.7
HDAC6-234ENST00000493923 ARFGEF2Q9Y6D5 1785 aa10.67□□□□□ -0.7
HDAC6-234ENST00000493923 ANXA1P04083 346 aa10.67□□□□□ -0.7
HDAC6-234ENST00000493923 SRGNP10124 158 aa10.67□□□□□ -0.7
HDAC6-234ENST00000493923 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-234ENST00000493923 ABCC12Q96J65 1359 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 POTECB2RU33 542 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 MYL6BP14649 208 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 LMNB1P20700 586 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 PDE6BP35913 854 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 RIPK4P57078 832 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 PDIA6Q15084 440 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 RALBP1Q15311 655 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 KRT24Q2M2I5 525 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 PROSER3Q2NL68 480 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 CLEC4GQ6UXB4 293 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 LRP10Q7Z4F1 713 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 NBPF5PQ86XG9 351 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-234ENST00000493923 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
HDAC6-234ENST00000493923 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
HDAC6-234ENST00000493923 UBN2Q6ZU65 1347 aa10.65□□□□□ -0.7
HDAC6-234ENST00000493923 KLRG2A4D1S0 409 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-234ENST00000493923 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
HDAC6-234ENST00000493923 TOMM70O94826 608 aa10.65□□□□□ -0.7
HDAC6-234ENST00000493923 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
HDAC6-234ENST00000493923 PRPF40BQ6NWY9 871 aaKnown RBP10.65□□□□□ -0.7
HDAC6-234ENST00000493923 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
HDAC6-234ENST00000493923 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
HDAC6-234ENST00000493923 MYBBP1AQ9BQG0 1328 aaKnown RBP10.64□□□□□ -0.71
HDAC6-234ENST00000493923 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 GPTP24298 496 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 ST5P78524 1137 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 DNAJC5GQ8N7S2 189 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
HDAC6-234ENST00000493923 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 GLTPD2A6NH11 291 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-234ENST00000493923 SUSD4Q5VX71 490 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
HDAC6-234ENST00000493923 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms