RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
TSC1-207ENST00000493467 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 MCCP23508 829 aa11.8□□□□□ -0.52
TSC1-207ENST00000493467 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
TSC1-207ENST00000493467 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
TSC1-207ENST00000493467 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
TSC1-207ENST00000493467 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
TSC1-207ENST00000493467 LMO7Q8WWI1 1683 aa11.8□□□□□ -0.52
TSC1-207ENST00000493467 SOX12O15370 315 aa11.8□□□□□ -0.52
TSC1-207ENST00000493467 PKP1Q13835 747 aa11.8□□□□□ -0.52
TSC1-207ENST00000493467 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
TSC1-207ENST00000493467 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 CHMLP26374 656 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
TSC1-207ENST00000493467 ZSCAN23Q3MJ62 389 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
TSC1-207ENST00000493467 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 NFAT5O94916 1531 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
TSC1-207ENST00000493467 TAF7Q15545 349 aaPredicted RBP11.79□□□□□ -0.52
TSC1-207ENST00000493467 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
TSC1-207ENST00000493467 IL17REQ8NFR9 667 aa11.78□□□□□ -0.52
TSC1-207ENST00000493467 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
TSC1-207ENST00000493467 TMX3Q96JJ7 454 aa11.78□□□□□ -0.52
TSC1-207ENST00000493467 ANP32BQ92688 251 aaKnown RBP11.78□□□□□ -0.52
TSC1-207ENST00000493467 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
TSC1-207ENST00000493467 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 BRD1O95696 1058 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 HOXB7P09629 217 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 NEK4P51957 841 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
TSC1-207ENST00000493467 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
TSC1-207ENST00000493467 MBD3O95983 291 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
TSC1-207ENST00000493467 UBTFL1P0CB47 393 aaPredicted RBP11.76□□□□□ -0.53
TSC1-207ENST00000493467 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
TSC1-207ENST00000493467 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
TSC1-207ENST00000493467 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
TSC1-207ENST00000493467 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
TSC1-207ENST00000493467 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
TSC1-207ENST00000493467 PRPF40AO75400 957 aaKnown RBP11.75□□□□□ -0.53
TSC1-207ENST00000493467 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
TSC1-207ENST00000493467 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
TSC1-207ENST00000493467 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
TSC1-207ENST00000493467 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
TSC1-207ENST00000493467 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
TSC1-207ENST00000493467 HSPA4P34932 840 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
TSC1-207ENST00000493467 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 RILPL2Q969X0 211 aa11.74□□□□□ -0.53
TSC1-207ENST00000493467 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
TSC1-207ENST00000493467 PDIA6Q15084 440 aa11.73□□□□□ -0.53
TSC1-207ENST00000493467 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
TSC1-207ENST00000493467 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
TSC1-207ENST00000493467 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
TSC1-207ENST00000493467 RAD50Q92878 1312 aa11.73□□□□□ -0.53
TSC1-207ENST00000493467 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
TSC1-207ENST00000493467 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
TSC1-207ENST00000493467 TMEM63CQ9P1W3 806 aa11.72□□□□□ -0.53
TSC1-207ENST00000493467 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
TSC1-207ENST00000493467 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
TSC1-207ENST00000493467 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
TSC1-207ENST00000493467 IP6K1Q92551 441 aa11.72□□□□□ -0.53
TSC1-207ENST00000493467 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
TSC1-207ENST00000493467 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
TSC1-207ENST00000493467 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
TSC1-207ENST00000493467 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
TSC1-207ENST00000493467 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
TSC1-207ENST00000493467 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
TSC1-207ENST00000493467 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.53
TSC1-207ENST00000493467 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.53
TSC1-207ENST00000493467 GNPATO15228 680 aa11.71□□□□□ -0.54
TSC1-207ENST00000493467 SGSM2O43147 1006 aa11.71□□□□□ -0.54
TSC1-207ENST00000493467 KCNA6P17658 529 aa11.71□□□□□ -0.54
TSC1-207ENST00000493467 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.54
TSC1-207ENST00000493467 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
TSC1-207ENST00000493467 MTX1Q13505 466 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 IL25Q9H293 177 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 SLIT3O75094 1523 aa11.7□□□□□ -0.54
TSC1-207ENST00000493467 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms