RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
CTDSP1-210ENST00000491064 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
CTDSP1-210ENST00000491064 L3MBTL3Q96JM7 780 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-210ENST00000491064 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
CTDSP1-210ENST00000491064 A1BGP04217 495 aa18.46■□□□□ 0.55
CTDSP1-210ENST00000491064 ST5P78524 1137 aa18.46■□□□□ 0.55
CTDSP1-210ENST00000491064 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-210ENST00000491064 NPHP1O15259 732 aa18.45■□□□□ 0.54
CTDSP1-210ENST00000491064 C7orf43Q8WVR3 580 aa18.45■□□□□ 0.54
CTDSP1-210ENST00000491064 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
CTDSP1-210ENST00000491064 FMNL2Q96PY5 1086 aa18.44■□□□□ 0.54
CTDSP1-210ENST00000491064 ADAMTSL1Q8N6G6 1762 aa18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 VEGFBP49765 207 aa18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
CTDSP1-210ENST00000491064 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
CTDSP1-210ENST00000491064 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-210ENST00000491064 AIDAQ96BJ3 306 aa18.42■□□□□ 0.54
CTDSP1-210ENST00000491064 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
CTDSP1-210ENST00000491064 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
CTDSP1-210ENST00000491064 KCNQ3O43525 872 aa18.4■□□□□ 0.54
CTDSP1-210ENST00000491064 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-210ENST00000491064 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-210ENST00000491064 WBP1LQ9NX94 342 aa18.4■□□□□ 0.54
CTDSP1-210ENST00000491064 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
CTDSP1-210ENST00000491064 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 NPR1P16066 1061 aa18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■■ 27
CTDSP1-210ENST00000491064 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 CLEC4GQ6UXB4 293 aa18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 ZNF277Q9NRM2 450 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 KIF7Q2M1P5 1343 aa18.39■□□□□ 0.53
CTDSP1-210ENST00000491064 KLRG2A4D1S0 409 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-210ENST00000491064 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
CTDSP1-210ENST00000491064 EPHX2P34913 555 aa18.38■□□□□ 0.53
CTDSP1-210ENST00000491064 OLFM4Q6UX06 510 aa18.38■□□□□ 0.53
CTDSP1-210ENST00000491064 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
CTDSP1-210ENST00000491064 LBX1P52954 281 aa18.37■□□□□ 0.53
CTDSP1-210ENST00000491064 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
CTDSP1-210ENST00000491064 RASSF10A6NK89 507 aa18.36■□□□□ 0.53
CTDSP1-210ENST00000491064 RNF123Q5XPI4 1314 aa18.36■□□□□ 0.53
CTDSP1-210ENST00000491064 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
CTDSP1-210ENST00000491064 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
CTDSP1-210ENST00000491064 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
CTDSP1-210ENST00000491064 FZD9O00144 591 aa18.35■□□□□ 0.53
CTDSP1-210ENST00000491064 DEFB115Q30KQ5 88 aa18.35■□□□□ 0.53
CTDSP1-210ENST00000491064 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-210ENST00000491064 CNTROBQ8N137 903 aa18.35■□□□□ 0.53
CTDSP1-210ENST00000491064 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 IARSP41252 1262 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 MAP1SQ66K74 1059 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 PHACTR3Q96KR7 559 aa18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 NIP7Q9Y221 180 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTDSP1-210ENST00000491064 SNED1Q8TER0 1413 aa18.33■□□□□ 0.53
CTDSP1-210ENST00000491064 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 RGL2O15211 777 aa18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 GPC2Q8N158 579 aa18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 SYNE4Q8N205 404 aa18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
CTDSP1-210ENST00000491064 NBPF26B4DH59 902 aa18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 MAP2K1Q02750 393 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 NBPF10Q6P3W6 841 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 NBPF15Q8N660 670 aa18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 LTBP1Q14766 1721 aa18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
CTDSP1-210ENST00000491064 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 PSMD1Q99460 953 aa18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-210ENST00000491064 COL4A5P29400 1685 aa18.29■□□□□ 0.52
CTDSP1-210ENST00000491064 SLC34A2O95436 690 aa18.29■□□□□ 0.52
CTDSP1-210ENST00000491064 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTDSP1-210ENST00000491064 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-210ENST00000491064 HLFQ16534 295 aa18.28■□□□□ 0.52
CTDSP1-210ENST00000491064 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
CTDSP1-210ENST00000491064 TRPM7Q96QT4 1865 aa18.28■□□□□ 0.52
CTDSP1-210ENST00000491064 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
CTDSP1-210ENST00000491064 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
CTDSP1-210ENST00000491064 MCM10Q7L590 875 aa18.27■□□□□ 0.52
CTDSP1-210ENST00000491064 ABCC12Q96J65 1359 aa18.27■□□□□ 0.51
CTDSP1-210ENST00000491064 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
CTDSP1-210ENST00000491064 NUP98P52948 1817 aa18.26■□□□□ 0.51
CTDSP1-210ENST00000491064 GTF2E1P29083 439 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-210ENST00000491064 EIF6P56537 245 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-210ENST00000491064 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-210ENST00000491064 GJA3Q9Y6H8 435 aa18.26■□□□□ 0.51
CTDSP1-210ENST00000491064 LMOD1P29536 600 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-210ENST00000491064 SCNN1DP51172 638 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms