RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 FOXN1O15353 648 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 S1PR4O95977 384 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 CDCA8Q53HL2 280 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 PRPF38BQ5VTL8 546 aaKnown RBP6.76□□□□□ -1.33
PTPRK-213ENST00000490332 TMC1Q8TDI8 760 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 PPP4R2Q9NY27 417 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 AKAP12Q02952 1782 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 TRPM3Q9HCF6 1732 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-213ENST00000490332 CLTCL1P53675 1640 aa6.76□□□□□ -1.33
PTPRK-213ENST00000490332 RGPD8O14715 1765 aaPredicted RBP6.75□□□□□ -1.33
PTPRK-213ENST00000490332 KIAA0232Q92628 1395 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 PLEKHG2Q9H7P9 1386 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 DDB1Q16531 1140 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 PLA2G2CQ5R387 149 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 TSHZ2Q9NRE2 1034 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 LRRC37A3O60309 1634 aa6.75□□□□□ -1.33
PTPRK-213ENST00000490332 MYBBP1AQ9BQG0 1328 aaKnown RBP6.75□□□□□ -1.33
PTPRK-213ENST00000490332 PXDNLA1KZ92 1463 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 INSRP06213 1382 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 WFS1O76024 890 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 TMF1P82094 1093 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
PTPRK-213ENST00000490332 POLR3GLQ9BT43 218 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 PRR14Q9BWN1 585 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 PKD2L1Q9P0L9 805 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 STK17AQ9UEE5 414 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
PTPRK-213ENST00000490332 KDM2BQ8NHM5 1336 aa6.74□□□□□ -1.33
PTPRK-213ENST00000490332 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
PTPRK-213ENST00000490332 CUL9Q8IWT3 2517 aa6.73□□□□□ -1.33
PTPRK-213ENST00000490332 NFX1Q12986 1120 aaKnown RBP6.73□□□□□ -1.33
PTPRK-213ENST00000490332 ZNF827Q17R98 1081 aa6.73□□□□□ -1.33
PTPRK-213ENST00000490332 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
PTPRK-213ENST00000490332 GCC1Q96CN9 775 aa6.73□□□□□ -1.33
PTPRK-213ENST00000490332 TNRC6CQ9HCJ0 1690 aaKnown RBP6.73□□□□□ -1.33
PTPRK-213ENST00000490332 SMG6Q86US8 1419 aaKnown RBP6.73□□□□□ -1.33
PTPRK-213ENST00000490332 WIPF1O43516 503 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 CCDC184Q52MB2 194 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 LCE2CQ5TA81 110 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
PTPRK-213ENST00000490332 NLRP13Q86W25 1043 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 NUDCQ9Y266 331 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 PNPLA7Q6ZV29 1317 aa6.72□□□□□ -1.33
PTPRK-213ENST00000490332 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
PTPRK-213ENST00000490332 KNDC1Q76NI1 1749 aa6.71□□□□□ -1.34
PTPRK-213ENST00000490332 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
PTPRK-213ENST00000490332 GMPR2Q9P2T1 348 aaKnown RBP6.71□□□□□ -1.34
PTPRK-213ENST00000490332 TRPM1Q7Z4N2 1603 aa6.71□□□□□ -1.34
PTPRK-213ENST00000490332 NHSQ6T4R5 1651 aa6.71□□□□□ -1.34
PTPRK-213ENST00000490332 CRB1P82279 1406 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 ANKARQ7Z5J8 1434 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 ACTN4O43707 911 aaKnown RBP6.7□□□□□ -1.34
PTPRK-213ENST00000490332 AVPP01185 164 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 LBX1P52954 281 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 SLC27A3Q5K4L6 730 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 TFCP2L1Q9NZI6 479 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 TUBGCP6Q96RT7 1819 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 IGSF1Q8N6C5 1336 aa6.7□□□□□ -1.34
PTPRK-213ENST00000490332 KIF1BO60333 1816 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 WNK3Q9BYP7 1800 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 LMO7Q8WWI1 1683 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 DLL1O00548 723 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 PER1O15534 1290 aaPredicted RBP6.69□□□□□ -1.34
PTPRK-213ENST00000490332 ADH1BP00325 375 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 SLC4A3P48751 1232 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 NBPF1Q3BBV0 1214 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 MARCH10Q8NA82 808 aaPredicted RBP6.69□□□□□ -1.34
PTPRK-213ENST00000490332 CFAP44Q96MT7 982 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 TESK2Q96S53 571 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 RNF123Q5XPI4 1314 aa6.69□□□□□ -1.34
PTPRK-213ENST00000490332 EIF3AQ14152 1382 aaKnown RBP6.69□□□□□ -1.34
PTPRK-213ENST00000490332 PIK3C2AO00443 1686 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 E2F4Q16254 413 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 WAPLQ7Z5K2 1190 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 TOR4AQ9NXH8 423 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 KAT6BQ8WYB5 2073 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 CPDO75976 1380 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 ABCC11Q96J66 1382 aa6.68□□□□□ -1.34
PTPRK-213ENST00000490332 PKD1L3Q7Z443 1732 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 COL5A2P05997 1499 aaPredicted RBP6.67□□□□□ -1.34
PTPRK-213ENST00000490332 HSPA8P11142 646 aaKnown RBP6.67□□□□□ -1.34
PTPRK-213ENST00000490332 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
PTPRK-213ENST00000490332 FOXC1Q12948 553 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 SLC6A16Q9GZN6 736 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 PANK3Q9H999 370 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
PTPRK-213ENST00000490332 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 RBM19Q9Y4C8 960 aaKnown RBP6.67□□□□□ -1.34
PTPRK-213ENST00000490332 CNTNAP1P78357 1384 aa6.67□□□□□ -1.34
PTPRK-213ENST00000490332 BTAF1O14981 1849 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 KCPQ6ZWJ8 1503 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 INSM1Q01101 510 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-213ENST00000490332 NGEFQ8N5V2 710 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 TMEM134Q9H6X4 195 aa6.66□□□□□ -1.34
PTPRK-213ENST00000490332 RRAGCQ9HB90 399 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms