RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TFCP2L1Q9NZI6 479 aa17.67■□□□□ 0.42
C9orf3-221ENST00000489562 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
C9orf3-221ENST00000489562 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
C9orf3-221ENST00000489562 TRAPPC3LQ5T215 181 aa17.66■□□□□ 0.42
C9orf3-221ENST00000489562 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
C9orf3-221ENST00000489562 ANKRD13DQ6ZTN6 518 aa17.66■□□□□ 0.42
C9orf3-221ENST00000489562 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
C9orf3-221ENST00000489562 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
C9orf3-221ENST00000489562 MAP3K15Q6ZN16 1313 aa17.66■□□□□ 0.42
C9orf3-221ENST00000489562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
C9orf3-221ENST00000489562 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
C9orf3-221ENST00000489562 SLC15A2Q16348 729 aa17.65■□□□□ 0.42
C9orf3-221ENST00000489562 AFDNP55196 1824 aaKnown RBP17.65■□□□□ 0.42
C9orf3-221ENST00000489562 ADCY9O60503 1353 aa17.65■□□□□ 0.42
C9orf3-221ENST00000489562 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 TRIM27P14373 513 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 RFC4P35249 363 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 TTLL7Q6ZT98 887 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 RIC3Q7Z5B4 369 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 NARFQ9UHQ1 456 aa17.64■□□□□ 0.41
C9orf3-221ENST00000489562 ZPR1O75312 459 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 PHF14O94880 888 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
C9orf3-221ENST00000489562 DNAAF4Q8WXU2 420 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
C9orf3-221ENST00000489562 ARXQ96QS3 562 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-221ENST00000489562 ZNF652Q9Y2D9 606 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 ABCC4O15439 1325 aa17.63■□□□□ 0.41
C9orf3-221ENST00000489562 CAMTA2O94983 1202 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
C9orf3-221ENST00000489562 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
C9orf3-221ENST00000489562 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
C9orf3-221ENST00000489562 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
C9orf3-221ENST00000489562 AMIGO3Q86WK7 504 aa17.61■□□□□ 0.41
C9orf3-221ENST00000489562 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-221ENST00000489562 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
C9orf3-221ENST00000489562 PLIN1O60240 522 aa17.6■□□□□ 0.41
C9orf3-221ENST00000489562 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
C9orf3-221ENST00000489562 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
C9orf3-221ENST00000489562 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-221ENST00000489562 F6X3S4 739 aa17.59■□□□□ 0.41
C9orf3-221ENST00000489562 TCIRG1Q13488 830 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
C9orf3-221ENST00000489562 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-221ENST00000489562 LINS1Q8NG48 757 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.4
C9orf3-221ENST00000489562 ALDH1L1O75891 902 aa17.57■□□□□ 0.4
C9orf3-221ENST00000489562 SRCIN1Q9C0H9 1055 aa17.57■□□□□ 0.4
C9orf3-221ENST00000489562 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 MSH5O43196 834 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 TRIM28Q13263 835 aaKnown RBP17.56■□□□□ 0.4
C9orf3-221ENST00000489562 HLFQ16534 295 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 MYD88Q99836 296 aa17.56■□□□□ 0.4
C9orf3-221ENST00000489562 SRP68Q9UHB9 627 aaKnown RBP17.56■□□□□ 0.4
C9orf3-221ENST00000489562 RLBP1P12271 317 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
C9orf3-221ENST00000489562 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
C9orf3-221ENST00000489562 NEFLP07196 543 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 GYS1P13807 737 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 MVPQ14764 893 aaKnown RBP17.54■□□□□ 0.4
C9orf3-221ENST00000489562 PARP10Q53GL7 1025 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
C9orf3-221ENST00000489562 NEURL1BA8MQ27 555 aa17.53■□□□□ 0.4
C9orf3-221ENST00000489562 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
C9orf3-221ENST00000489562 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
C9orf3-221ENST00000489562 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
C9orf3-221ENST00000489562 NIP7Q9Y221 180 aaKnown RBP eCLIP17.53■□□□□ 0.4
C9orf3-221ENST00000489562 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
C9orf3-221ENST00000489562 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-221ENST00000489562 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
C9orf3-221ENST00000489562 FKBP8Q14318 412 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 GCKRQ14397 625 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
C9orf3-221ENST00000489562 PPP1R42Q7Z4L9 355 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 NLRP10Q86W26 655 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
C9orf3-221ENST00000489562 MYH3P11055 1940 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 373.5 ms