RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
ACTN4-206ENST00000489451 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
ACTN4-206ENST00000489451 KDM3BQ7LBC6 1761 aa15.75■□□□□ 0.11
ACTN4-206ENST00000489451 NBPF26B4DH59 902 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 H0YIN7 160 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 LMNB1P20700 586 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 NBPF10Q6P3W6 841 aaKnown RBP15.73■□□□□ 0.11
ACTN4-206ENST00000489451 NBPF15Q8N660 670 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 ABHD8Q96I13 439 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
ACTN4-206ENST00000489451 ZC3H4Q9UPT8 1303 aaKnown RBP15.72■□□□□ 0.11
ACTN4-206ENST00000489451 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
ACTN4-206ENST00000489451 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
ACTN4-206ENST00000489451 NUDCQ9Y266 331 aa15.72■□□□□ 0.11
ACTN4-206ENST00000489451 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
ACTN4-206ENST00000489451 GLTPD2A6NH11 291 aa15.7■□□□□ 0.1
ACTN4-206ENST00000489451 POTECB2RU33 542 aa15.7■□□□□ 0.1
ACTN4-206ENST00000489451 C21orf2O43822 256 aa15.7■□□□□ 0.1
ACTN4-206ENST00000489451 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
ACTN4-206ENST00000489451 ZNF622Q969S3 477 aaKnown RBP eCLIP15.7■□□□□ 0.1
ACTN4-206ENST00000489451 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
ACTN4-206ENST00000489451 SRGNP10124 158 aa15.69■□□□□ 0.1
ACTN4-206ENST00000489451 PDE6BP35913 854 aa15.69■□□□□ 0.1
ACTN4-206ENST00000489451 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
ACTN4-206ENST00000489451 SETDB2Q96T68 719 aa15.69■□□□□ 0.1
ACTN4-206ENST00000489451 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
ACTN4-206ENST00000489451 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
ACTN4-206ENST00000489451 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
ACTN4-206ENST00000489451 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
ACTN4-206ENST00000489451 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
ACTN4-206ENST00000489451 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
ACTN4-206ENST00000489451 PDZRN3Q9UPQ7 1066 aa15.67■□□□□ 0.1
ACTN4-206ENST00000489451 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
ACTN4-206ENST00000489451 NUP98P52948 1817 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
ACTN4-206ENST00000489451 HLFQ16534 295 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 C7orf43Q8WVR3 580 aa15.66■□□□□ 0.1
ACTN4-206ENST00000489451 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
ACTN4-206ENST00000489451 KLRG2A4D1S0 409 aaPredicted RBP15.65■□□□□ 0.1
ACTN4-206ENST00000489451 ST5P78524 1137 aa15.65■□□□□ 0.1
ACTN4-206ENST00000489451 VEGFAP15692 232 aaPredicted RBP15.64■□□□□ 0.09
ACTN4-206ENST00000489451 LBX1P52954 281 aa15.64■□□□□ 0.09
ACTN4-206ENST00000489451 OLFM4Q6UX06 510 aa15.64■□□□□ 0.09
ACTN4-206ENST00000489451 SNED1Q8TER0 1413 aa15.64■□□□□ 0.09
ACTN4-206ENST00000489451 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
ACTN4-206ENST00000489451 CREBZFQ9NS37 354 aa15.64■□□□□ 0.09
ACTN4-206ENST00000489451 ABCC12Q96J65 1359 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 RGL2O15211 777 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 RGS19P49795 217 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
ACTN4-206ENST00000489451 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 NBPF5PQ86XG9 351 aaPredicted RBP15.63■□□□□ 0.09
ACTN4-206ENST00000489451 CNKSR1Q969H4 720 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 TAOK3Q9H2K8 898 aa15.63■□□□□ 0.09
ACTN4-206ENST00000489451 NIP7Q9Y221 180 aaKnown RBP eCLIP15.63■□□□□ 0.09
ACTN4-206ENST00000489451 NFE2L2Q16236 605 aa15.62■□□□□ 0.09
ACTN4-206ENST00000489451 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
ACTN4-206ENST00000489451 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
ACTN4-206ENST00000489451 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
ACTN4-206ENST00000489451 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
ACTN4-206ENST00000489451 CNTNAP1P78357 1384 aa15.61■□□□□ 0.09
ACTN4-206ENST00000489451 FAM177BA6PVY3 158 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 NPHP1O15259 732 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
ACTN4-206ENST00000489451 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 NPR1P16066 1061 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 LRP10Q7Z4F1 713 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
ACTN4-206ENST00000489451 CFAP44Q96MT7 982 aa15.59■□□□□ 0.09
ACTN4-206ENST00000489451 COL4A5P29400 1685 aa15.59■□□□□ 0.09
ACTN4-206ENST00000489451 TPTE2Q6XPS3 522 aa15.58■□□□□ 0.08
ACTN4-206ENST00000489451 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
ACTN4-206ENST00000489451 NGEFQ8N5V2 710 aa15.58■□□□□ 0.08
ACTN4-206ENST00000489451 MAP3K15Q6ZN16 1313 aa15.58■□□□□ 0.08
ACTN4-206ENST00000489451 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 SCN4AP35499 1836 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 CCDC93Q567U6 631 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 DPY19L2Q6NUT2 758 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
ACTN4-206ENST00000489451 ZNF541Q9H0D2 1346 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 RIC1Q4ADV7 1423 aa15.57■□□□□ 0.08
ACTN4-206ENST00000489451 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
ACTN4-206ENST00000489451 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
ACTN4-206ENST00000489451 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
ACTN4-206ENST00000489451 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
ACTN4-206ENST00000489451 IBTKQ9P2D0 1353 aaPredicted RBP15.55■□□□□ 0.08
ACTN4-206ENST00000489451 HSPA8P11142 646 aaKnown RBP15.55■□□□□ 0.08
ACTN4-206ENST00000489451 MYL6BP14649 208 aa15.55■□□□□ 0.08
ACTN4-206ENST00000489451 PDIA6Q15084 440 aa15.55■□□□□ 0.08
ACTN4-206ENST00000489451 C3orf67Q6ZVT6 689 aa15.55■□□□□ 0.08
ACTN4-206ENST00000489451 L3MBTL3Q96JM7 780 aaPredicted RBP15.55■□□□□ 0.08
ACTN4-206ENST00000489451 GPTP24298 496 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 PROSER3Q2NL68 480 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 SUSD4Q5VX71 490 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms