RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
TOP3A-206ENST00000489131 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
TOP3A-206ENST00000489131 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-206ENST00000489131 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
TOP3A-206ENST00000489131 RGPD3A6NKT7 1758 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-206ENST00000489131 RGPD4Q7Z3J3 1758 aa16.14■□□□□ 0.17
TOP3A-206ENST00000489131 RGL2O15211 777 aa16.14■□□□□ 0.17
TOP3A-206ENST00000489131 IGHDP01880 384 aa16.14■□□□□ 0.17
TOP3A-206ENST00000489131 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
TOP3A-206ENST00000489131 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.17
TOP3A-206ENST00000489131 RIC3Q7Z5B4 369 aa16.14■□□□□ 0.17
TOP3A-206ENST00000489131 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-206ENST00000489131 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
TOP3A-206ENST00000489131 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
TOP3A-206ENST00000489131 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
TOP3A-206ENST00000489131 FAM182BQ5T319 152 aa16.13■□□□□ 0.17
TOP3A-206ENST00000489131 POTEAQ6S8J7 498 aa16.13■□□□□ 0.17
TOP3A-206ENST00000489131 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
TOP3A-206ENST00000489131 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
TOP3A-206ENST00000489131 NEURL1BA8MQ27 555 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 GNAI2P04899 355 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 HMGB2P26583 209 aaKnown RBP16.12■□□□□ 0.17
TOP3A-206ENST00000489131 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
TOP3A-206ENST00000489131 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-206ENST00000489131 NEXNQ0ZGT2 675 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
TOP3A-206ENST00000489131 TTLL7Q6ZT98 887 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 SMC5Q8IY18 1101 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 ANKRD36CQ5JPF3 1778 aa16.12■□□□□ 0.17
TOP3A-206ENST00000489131 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
TOP3A-206ENST00000489131 CEP85Q6P2H3 762 aa16.11■□□□□ 0.17
TOP3A-206ENST00000489131 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
TOP3A-206ENST00000489131 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
TOP3A-206ENST00000489131 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
TOP3A-206ENST00000489131 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
TOP3A-206ENST00000489131 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 GRM8O00222 908 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 UBTFL1P0CB47 393 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-206ENST00000489131 MTX1Q13505 466 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 GCKRQ14397 625 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 KIF6Q6ZMV9 814 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
TOP3A-206ENST00000489131 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-206ENST00000489131 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.16
TOP3A-206ENST00000489131 GIGYF2Q6Y7W6 1299 aaKnown RBP16.08■□□□□ 0.16
TOP3A-206ENST00000489131 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 MYD88Q99836 296 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-206ENST00000489131 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
TOP3A-206ENST00000489131 PLSCR1O15162 318 aa16.07■□□□□ 0.16
TOP3A-206ENST00000489131 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
TOP3A-206ENST00000489131 NUP98P52948 1817 aa16.07■□□□□ 0.16
TOP3A-206ENST00000489131 A0A087WZG4 1122 aa16.06■□□□□ 0.16
TOP3A-206ENST00000489131 CASP7P55210 303 aa16.06■□□□□ 0.16
TOP3A-206ENST00000489131 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
TOP3A-206ENST00000489131 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
TOP3A-206ENST00000489131 H7C1W4 665 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 HMMRO75330 724 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 TRIM37O94972 964 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 POLA2Q14181 598 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
TOP3A-206ENST00000489131 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 C9orf78Q9NZ63 289 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-206ENST00000489131 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
TOP3A-206ENST00000489131 EP400Q96L91 3159 aa16.05■□□□□ 0.16
TOP3A-206ENST00000489131 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
TOP3A-206ENST00000489131 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
TOP3A-206ENST00000489131 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-206ENST00000489131 RABL6Q3YEC7 729 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-206ENST00000489131 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
TOP3A-206ENST00000489131 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
TOP3A-206ENST00000489131 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
TOP3A-206ENST00000489131 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
TOP3A-206ENST00000489131 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
TOP3A-206ENST00000489131 ADRA2BP18089 450 aa16.02■□□□□ 0.16
TOP3A-206ENST00000489131 NUCB1Q02818 461 aa16.02■□□□□ 0.16
TOP3A-206ENST00000489131 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
TOP3A-206ENST00000489131 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
TOP3A-206ENST00000489131 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
TOP3A-206ENST00000489131 HLFQ16534 295 aa16.01■□□□□ 0.15
TOP3A-206ENST00000489131 SUCLG2Q96I99 432 aa16.01■□□□□ 0.15
TOP3A-206ENST00000489131 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
TOP3A-206ENST00000489131 COL24A1Q17RW2 1714 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
TOP3A-206ENST00000489131 NLRP10Q86W26 655 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 PROM2Q8N271 834 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 TBC1D2BQ9UPU7 963 aa16■□□□□ 0.15
TOP3A-206ENST00000489131 KCNQ4P56696 695 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms