RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 KCTD15Q96SI1 283 aaPredicted RBP8.94□□□□□ -0.98
PDCD4-209ENST00000489049 CDV3Q9UKY7 258 aaKnown RBP8.94□□□□□ -0.98
PDCD4-209ENST00000489049 MYBBP1AQ9BQG0 1328 aaKnown RBP8.94□□□□□ -0.98
PDCD4-209ENST00000489049 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
PDCD4-209ENST00000489049 CBLBQ13191 982 aa8.93□□□□□ -0.98
PDCD4-209ENST00000489049 ERICH6BQ5W0A0 696 aa8.93□□□□□ -0.98
PDCD4-209ENST00000489049 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
PDCD4-209ENST00000489049 C14orf93Q9H972 538 aaKnown RBP8.93□□□□□ -0.98
PDCD4-209ENST00000489049 CAMSAP1Q5T5Y3 1602 aa8.93□□□□□ -0.98
PDCD4-209ENST00000489049 IQGAP1P46940 1657 aa8.93□□□□□ -0.98
PDCD4-209ENST00000489049 ZBED9Q6R2W3 1325 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 NEFLP07196 543 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.92□□□□□ -0.98
PDCD4-209ENST00000489049 NLRP13Q86W25 1043 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
PDCD4-209ENST00000489049 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
PDCD4-209ENST00000489049 PIK3C2BO00750 1634 aa8.91□□□□□ -0.98
PDCD4-209ENST00000489049 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
PDCD4-209ENST00000489049 HNRNPUQ00839 825 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDCD4-209ENST00000489049 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
PDCD4-209ENST00000489049 PIK3C2GO75747 1445 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 YEATS2Q9ULM3 1422 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 SPINT1O43278 529 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 AP1G2O75843 785 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 BRPF1P55201 1214 aaPredicted RBP8.9□□□□□ -0.98
PDCD4-209ENST00000489049 PTK2Q05397 1052 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.98
PDCD4-209ENST00000489049 POLR3GLQ9BT43 218 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 GPSM3Q9Y4H4 160 aa8.9□□□□□ -0.98
PDCD4-209ENST00000489049 PTSQ03393 145 aa8.89□□□□□ -0.99
PDCD4-209ENST00000489049 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
PDCD4-209ENST00000489049 KNSTRNQ9Y448 316 aa8.89□□□□□ -0.99
PDCD4-209ENST00000489049 SYNMO15061 1565 aa8.89□□□□□ -0.99
PDCD4-209ENST00000489049 MYO3AQ8NEV4 1616 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 ADGRF5Q8IZF2 1346 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 FIGNL2A6NMB9 653 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 EPS8L1Q8TE68 723 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 PPLO60437 1756 aa8.88□□□□□ -0.99
PDCD4-209ENST00000489049 CENPJQ9HC77 1338 aaPredicted RBP8.87□□□□□ -0.99
PDCD4-209ENST00000489049 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
PDCD4-209ENST00000489049 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
PDCD4-209ENST00000489049 CFAP70Q5T0N1 1121 aa8.87□□□□□ -0.99
PDCD4-209ENST00000489049 PANK3Q9H999 370 aa8.87□□□□□ -0.99
PDCD4-209ENST00000489049 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
PDCD4-209ENST00000489049 LRPPRCP42704 1394 aaKnown RBP8.86□□□□□ -0.99
PDCD4-209ENST00000489049 NINLQ9Y2I6 1382 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 ERVK-7P63135 1459 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 PDE3BQ13370 1112 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 IDI1Q13907 227 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 NGEFQ8N5V2 710 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.86□□□□□ -0.99
PDCD4-209ENST00000489049 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 AGBL1Q96MI9 1066 aa8.86□□□□□ -0.99
PDCD4-209ENST00000489049 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
PDCD4-209ENST00000489049 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 FAM9BQ8IZU0 186 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 GPR161Q8N6U8 529 aaKnown RBP8.85□□□□□ -0.99
PDCD4-209ENST00000489049 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 UGGT1Q9NYU2 1555 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 NEXMIFQ5QGS0 1516 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
PDCD4-209ENST00000489049 PREX1Q8TCU6 1659 aa8.85□□□□□ -0.99
PDCD4-209ENST00000489049 ADGRB1O14514 1584 aa8.84□□□□□ -0.99
PDCD4-209ENST00000489049 CTSOP43234 321 aaPredicted RBP8.84□□□□□ -0.99
PDCD4-209ENST00000489049 RELBQ01201 579 aa8.84□□□□□ -0.99
PDCD4-209ENST00000489049 KRT76Q01546 638 aa8.84□□□□□ -0.99
PDCD4-209ENST00000489049 CCDC155Q8N6L0 562 aa8.84□□□□□ -0.99
PDCD4-209ENST00000489049 SUPT16HQ9Y5B9 1047 aaKnown RBP8.84□□□□□ -0.99
PDCD4-209ENST00000489049 ASXL1Q8IXJ9 1541 aa8.84□□□□□ -0.99
PDCD4-209ENST00000489049 EVC2Q86UK5 1308 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
PDCD4-209ENST00000489049 KIF13AQ9H1H9 1805 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 RFC5P40937 340 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
PDCD4-209ENST00000489049 INSM2Q96T92 566 aaPredicted RBP8.83□□□□□ -1
PDCD4-209ENST00000489049 TMPRSS4Q9NRS4 437 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 MROH2AA6NES4 1674 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
PDCD4-209ENST00000489049 SLC35F4A4IF30 521 aa8.82□□□□□ -1
PDCD4-209ENST00000489049 CCDC184Q52MB2 194 aa8.82□□□□□ -1
PDCD4-209ENST00000489049 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
PDCD4-209ENST00000489049 SIRT1Q96EB6 747 aa8.82□□□□□ -1
PDCD4-209ENST00000489049 SIGLEC1Q9BZZ2 1709 aa8.82□□□□□ -1
PDCD4-209ENST00000489049 RAB15P59190 212 aa8.81□□□□□ -1
PDCD4-209ENST00000489049 DZIP3Q86Y13 1208 aaKnown RBP8.81□□□□□ -1
PDCD4-209ENST00000489049 CNTNAP3BQ96NU0 1288 aa8.81□□□□□ -1
PDCD4-209ENST00000489049 CNTNAP3Q9BZ76 1288 aa8.81□□□□□ -1
PDCD4-209ENST00000489049 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
PDCD4-209ENST00000489049 NSD2O96028 1365 aa8.81□□□□□ -1
PDCD4-209ENST00000489049 TSPOAP1O95153 1857 aa8.81□□□□□ -1
PDCD4-209ENST00000489049 ESPNB1AK53 854 aa8.8□□□□□ -1
PDCD4-209ENST00000489049 ERVH48-1M5A8F1 160 aa8.8□□□□□ -1
PDCD4-209ENST00000489049 ADH1AP07327 375 aa8.8□□□□□ -1
PDCD4-209ENST00000489049 RNF217Q8TC41 542 aa8.8□□□□□ -1
PDCD4-209ENST00000489049 COL25A1Q9BXS0 654 aaPredicted RBP8.8□□□□□ -1
PDCD4-209ENST00000489049 ZNF395Q9H8N7 513 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms